RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 ARHGAP4P98171 946 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 GRB10Q13322 594 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 KRT31Q15323 416 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 UBE2SQ16763 222 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 Q3C1V9 767 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 FKBP15Q5T1M5 1219 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 TTI2Q6NXR4 508 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 ARHGAP27Q6ZUM4 889 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 RASGRP2Q7LDG7 609 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 TRIM46Q7Z4K8 759 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 CLEC10AQ8IUN9 316 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 SIAH1Q8IUQ4 282 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 TMTC1Q8IUR5 882 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 CSGALNACT2Q8N6G5 542 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 TC2NQ8N9U0 490 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 ZNF397Q8NF99 534 aaPredicted RBP7.38□□□□□ -1.23
HDLBP-243ENST00000488923 LPAR1Q92633 364 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 STAMQ92783 540 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 PHOX2BQ99453 314 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 MMTAG2Q9BU76 263 aaKnown RBP7.38□□□□□ -1.23
HDLBP-243ENST00000488923 MAF1Q9H063 256 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 DEFB129Q9H1M3 183 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 TAOK3Q9H2K8 898 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 VCPKMTQ9H867 229 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 ZNHIT6Q9NWK9 470 aaKnown RBP7.38□□□□□ -1.23
HDLBP-243ENST00000488923 MAP3K20Q9NYL2 800 aaKnown RBP7.38□□□□□ -1.23
HDLBP-243ENST00000488923 ZBTB21Q9ULJ3 1066 aa7.38□□□□□ -1.23
HDLBP-243ENST00000488923 MYH8P13535 1937 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 TCP10L2B9ZVM9 353 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 MEIS2O14770 477 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 SLC37A4O43826 429 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 DXOO77932 396 aaKnown RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 GDF11O95390 407 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 KCNA3P22001 575 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 CAP2P40123 477 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 CCT6AP40227 531 aaKnown RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 VEGFBP49765 207 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 ZNF280AP59817 542 aaPredicted RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 SETQ01105 290 aaPredicted RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 UBXN1Q04323 297 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 FIGNQ5HY92 759 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 CENPPQ6IPU0 288 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 CYP26C1Q6V0L0 522 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 KRT26Q7Z3Y9 468 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 CCDC84Q86UT8 332 aaPredicted RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 SULF1Q8IWU6 871 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 SMYD4Q8IYR2 804 aaPredicted RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 MB21D1Q8N884 522 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 CRYGNQ8WXF5 182 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 ERO1AQ96HE7 468 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 ZBED3Q96IU2 234 aaPredicted RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 PNMA5Q96PV4 448 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 WDR11Q9BZH6 1224 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 MTFR1LQ9H019 292 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 RANBP17Q9H2T7 1088 aaKnown RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 ZNF277Q9NRM2 450 aaPredicted RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 BLOC1S4Q9NUP1 217 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 TRMT1Q9NXH9 659 aaKnown RBP7.37□□□□□ -1.23
HDLBP-243ENST00000488923 PRR12Q9ULL5 1215 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 GDAQ9Y2T3 454 aa7.37□□□□□ -1.23
HDLBP-243ENST00000488923 PSME4Q14997 1843 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 CNTNAP1P78357 1384 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 CLRN2A0PK11 232 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 MYMKA6NI61 221 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 FAM196BA6NMK8 535 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L15C9J2P7 530 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L13C9JLJ4 530 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L11C9JVI0 530 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L18D6R9N7 530 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L22D6RA61 530 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L17D6RBQ6 530 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L19D6RCP7 530 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L20D6RJB6 530 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 GCOM1H8Y6P7 765 aaPredicted RBP7.36□□□□□ -1.23
HDLBP-243ENST00000488923 WDR46O15213 610 aaKnown RBP7.36□□□□□ -1.23
HDLBP-243ENST00000488923 IPO7O95373 1038 aaKnown RBP7.36□□□□□ -1.23
HDLBP-243ENST00000488923 SLU7O95391 586 aaKnown RBP7.36□□□□□ -1.23
HDLBP-243ENST00000488923 POLR2MP0CAP2 368 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 RPA1P27694 616 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 ZNF76P36508 570 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 MTIF2P46199 727 aaKnown RBP7.36□□□□□ -1.23
HDLBP-243ENST00000488923 PPP2R3AQ06190 1150 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L24Q0WX57 530 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 MCM6Q14566 821 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 HSP90AA4PQ58FG1 418 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 FAM26FQ5R3K3 315 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 DCAF15Q66K64 600 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 USP17L6PQ6QN14 398 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 MCF2L2Q86YR7 1114 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 TMEM139Q8IV31 216 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 MYOCDQ8IZQ8 938 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 TXLNBQ8N3L3 684 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 PDCL2Q8N4E4 241 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 OR8K1Q8NGG5 319 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 NEK9Q8TD19 979 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 FBXO41Q8TF61 875 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 ZNF592Q92610 1267 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 HAS1Q92839 578 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 CEP63Q96MT8 703 aa7.36□□□□□ -1.23
HDLBP-243ENST00000488923 ERGIC2Q96RQ1 377 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms