RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 LNPKQ9C0E8 428 aa7.28□□□□□ -1.24
PTPN4-212ENST00000488896 SLC52A2Q9HAB3 445 aa7.28□□□□□ -1.24
PTPN4-212ENST00000488896 CBLCQ9ULV8 474 aa7.28□□□□□ -1.24
PTPN4-212ENST00000488896 PDE6AP16499 860 aa7.27□□□□□ -1.25
PTPN4-212ENST00000488896 TRMT10BQ6PF06 316 aaKnown RBP7.27□□□□□ -1.25
PTPN4-212ENST00000488896 PROSER1Q86XN7 944 aa7.27□□□□□ -1.25
PTPN4-212ENST00000488896 PTRH1Q86Y79 214 aaKnown RBP7.27□□□□□ -1.25
PTPN4-212ENST00000488896 LILRB2Q8N423 598 aa7.27□□□□□ -1.25
PTPN4-212ENST00000488896 CXorf38Q8TB03 319 aa7.27□□□□□ -1.25
PTPN4-212ENST00000488896 THAP3Q8WTV1 239 aaPredicted RBP7.27□□□□□ -1.25
PTPN4-212ENST00000488896 RIC8BQ9NVN3 520 aa7.27□□□□□ -1.25
PTPN4-212ENST00000488896 CDK11AQ9UQ88 783 aaPredicted RBP7.27□□□□□ -1.25
PTPN4-212ENST00000488896 PTCH2Q9Y6C5 1203 aa7.27□□□□□ -1.25
PTPN4-212ENST00000488896 NCANO14594 1321 aa7.27□□□□□ -1.25
PTPN4-212ENST00000488896 CCDC66A2RUB6 948 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 MROH6A6NGR9 719 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 ARVCFO00192 962 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 RASGRP1O95267 797 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 ZNF28P17035 718 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 NAT1P18440 290 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 BUD31P41223 144 aaPredicted RBP7.26□□□□□ -1.25
PTPN4-212ENST00000488896 PLP2Q04941 152 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 GPR19Q15760 415 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 CRY1Q16526 586 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 ZC3H12BQ5HYM0 836 aaKnown RBP7.26□□□□□ -1.25
PTPN4-212ENST00000488896 FAM26FQ5R3K3 315 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 ERICH6BQ5W0A0 696 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 BTBD8Q5XKL5 378 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 NPM2Q86SE8 214 aaKnown RBP7.26□□□□□ -1.25
PTPN4-212ENST00000488896 ZSWIM2Q8NEG5 633 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 SLC7A14Q8TBB6 771 aa7.26□□□□□ -1.25
PTPN4-212ENST00000488896 ACOT7O00154 380 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 FBXO21O94952 628 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 AMY2AP04746 511 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 APPP05067 770 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 CELA3BP08861 270 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 AMY2BP19961 511 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 JAM2P57087 298 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 PFKPQ01813 784 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 KIAA2012Q0VF49 1180 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 SKIDA1Q1XH10 827 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 C2orf27AQ580R0 203 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 FAM47CQ5HY64 1035 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 CD276Q5ZPR3 534 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 C16orf59Q7L2K0 433 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 FAM124AQ86V42 546 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 CISD2Q8N5K1 135 aaKnown RBP7.25□□□□□ -1.25
PTPN4-212ENST00000488896 ZCCHC14Q8WYQ9 949 aaKnown RBP7.25□□□□□ -1.25
PTPN4-212ENST00000488896 LCORQ96JN0 433 aaPredicted RBP7.25□□□□□ -1.25
PTPN4-212ENST00000488896 TMEM168Q9H0V1 697 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 ZSWIM4Q9H7M6 989 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 DLL4Q9NR61 685 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 SFMBT1Q9UHJ3 866 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 SRPK3Q9UPE1 567 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 COQ6Q9Y2Z9 468 aa7.25□□□□□ -1.25
PTPN4-212ENST00000488896 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.24□□□□□ -1.25
PTPN4-212ENST00000488896 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.24□□□□□ -1.25
PTPN4-212ENST00000488896 CYP7B1O75881 506 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 EPHA5P54756 1037 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 NFE2L2Q16236 605 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 SKOR2Q2VWA4 1001 aaPredicted RBP7.24□□□□□ -1.25
PTPN4-212ENST00000488896 NLGN4XQ8N0W4 816 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 DTX3Q8N9I9 347 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 MRFAP1L1Q96HT8 127 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 MAGEB10Q96LZ2 347 aaPredicted RBP7.24□□□□□ -1.25
PTPN4-212ENST00000488896 DRC1Q96MC2 740 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 WRNIP1Q96S55 665 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 SLC39A2Q9NP94 309 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 HSPBP1Q9NZL4 362 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 ARHGAP20Q9P2F6 1191 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 FTSJ1Q9UET6 329 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 ZFP69BQ9UJL9 534 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 INVSQ9Y283 1065 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 ATP23Q9Y6H3 246 aa7.24□□□□□ -1.25
PTPN4-212ENST00000488896 FAM90A27PA6NNH2 459 aa7.23□□□□□ -1.25
PTPN4-212ENST00000488896 MAN2B1O00754 1011 aa7.23□□□□□ -1.25
PTPN4-212ENST00000488896 WNT9AO14904 365 aa7.23□□□□□ -1.25
PTPN4-212ENST00000488896 GSTA4O15217 222 aa7.23□□□□□ -1.25
PTPN4-212ENST00000488896 EFCAB14O75071 495 aa7.23□□□□□ -1.25
PTPN4-212ENST00000488896 ENO2P09104 434 aaPredicted RBP7.23□□□□□ -1.25
PTPN4-212ENST00000488896 PTPN1P18031 435 aaKnown RBP7.23□□□□□ -1.25
PTPN4-212ENST00000488896 ZFYVE27Q5T4F4 411 aa7.23□□□□□ -1.25
PTPN4-212ENST00000488896 BORAQ6PGQ7 559 aa7.23□□□□□ -1.25
PTPN4-212ENST00000488896 STPG3Q8N7X2 389 aa7.23□□□□□ -1.25
PTPN4-212ENST00000488896 YTHDC1Q96MU7 727 aaKnown RBP7.23□□□□□ -1.25
PTPN4-212ENST00000488896 ZDHHC9Q9Y397 364 aa7.23□□□□□ -1.25
PTPN4-212ENST00000488896 BRAPQ7Z569 592 aa7.22□□□□□ -1.25
PTPN4-212ENST00000488896 FGD2Q7Z6J4 655 aa7.22□□□□□ -1.25
PTPN4-212ENST00000488896 LGI4Q8N135 537 aa7.22□□□□□ -1.25
PTPN4-212ENST00000488896 GSTCDQ8NEC7 633 aa7.22□□□□□ -1.25
PTPN4-212ENST00000488896 SCLYQ96I15 445 aa7.22□□□□□ -1.25
PTPN4-212ENST00000488896 TACO1Q9BSH4 297 aaKnown RBP7.22□□□□□ -1.25
PTPN4-212ENST00000488896 KRTAP4-7Q9BYR0 210 aa7.22□□□□□ -1.25
PTPN4-212ENST00000488896 ZNF536O15090 1300 aa7.22□□□□□ -1.25
PTPN4-212ENST00000488896 PRAMEF25A6NGN4 478 aa7.21□□□□□ -1.26
PTPN4-212ENST00000488896 ZNF839A8K0R7 811 aa7.21□□□□□ -1.26
PTPN4-212ENST00000488896 ZNF561-AS1K7EIQ3 104 aa7.21□□□□□ -1.26
PTPN4-212ENST00000488896 RAPGEF3O95398 923 aa7.21□□□□□ -1.26
PTPN4-212ENST00000488896 CCDC144BQ3MJ40 725 aa7.21□□□□□ -1.26
PTPN4-212ENST00000488896 JMYQ8N9B5 988 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms