RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 RPS6KA1Q15418 735 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 KCNK18Q7Z418 384 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 RUBCNQ92622 972 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 C7orf25Q9BPX7 421 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 GOPCQ9HD26 462 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 NFS1Q9Y697 457 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 TTI1O43156 1089 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 EZRP15311 586 aaKnown RBP15.55■□□□□ 0.08
COL16A1-214ENST00000488128 PPP2R2AP63151 447 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 MECOMQ03112 1051 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 DHX9Q08211 1270 aaKnown RBP15.55■□□□□ 0.08
COL16A1-214ENST00000488128 IFFO1Q0D2I5 559 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 NBPF9Q3BBW0 867 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 FAM133BQ5BKY9 247 aaKnown RBP15.55■□□□□ 0.08
COL16A1-214ENST00000488128 CD302Q8IX05 232 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 MREGQ8N565 214 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 CDK5RAP3Q96JB5 506 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 ZHX3Q9H4I2 956 aa15.55■□□□□ 0.08
COL16A1-214ENST00000488128 RNF10Q8N5U6 811 aaKnown RBP15.54■□□□□ 0.08
COL16A1-214ENST00000488128 ARFGAP2Q8N6H7 521 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 CALML4Q96GE6 196 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 PLCB1Q9NQ66 1216 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 PNMA2Q9UL42 364 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 M0R2N6 131 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 KRIT1O00522 736 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 CTNND1O60716 968 aaKnown RBP15.54■□□□□ 0.08
COL16A1-214ENST00000488128 SF3B3Q15393 1217 aaKnown RBP15.54■□□□□ 0.08
COL16A1-214ENST00000488128 GKAP1Q5VSY0 366 aaPredicted RBP15.54■□□□□ 0.08
COL16A1-214ENST00000488128 MSL1Q68DK7 614 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 LRRC55Q6ZSA7 311 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 TBC1D1Q86TI0 1168 aaPredicted RBP15.54■□□□□ 0.08
COL16A1-214ENST00000488128 TBCKQ8TEA7 893 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 ANKS1AQ92625 1134 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 STAMBPL1Q96FJ0 436 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 SELENOSQ9BQE4 189 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 TRIM51Q9BSJ1 452 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 MTFR1LQ9H019 292 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 ISCUQ9H1K1 167 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 BLOC1S4Q9NUP1 217 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL16A1-214ENST00000488128 IFNAR2P48551 515 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 AMPD3Q01432 767 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 MYO1EQ12965 1108 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 PRPF4BQ13523 1007 aaKnown RBP15.54■□□□□ 0.08
COL16A1-214ENST00000488128 CLEC4GQ6UXB4 293 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 TXNRD3Q86VQ6 643 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 PAGR1Q9BTK6 254 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 BRIP1Q9BX63 1249 aa15.54■□□□□ 0.08
COL16A1-214ENST00000488128 TAF1P21675 1872 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 MYL1P05976 194 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 RPS8P62241 208 aaKnown RBP15.53■□□□□ 0.08
COL16A1-214ENST00000488128 GRB10Q13322 594 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 WLSQ5T9L3 541 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 DDX12PQ92771 950 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 MAD2L2Q9UI95 211 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 NR2E1Q9Y466 385 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 ATP6V0A2Q9Y487 856 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 SMCO2A6NFE2 343 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 F8W031 263 aaPredicted RBP15.53■□□□□ 0.08
COL16A1-214ENST00000488128 STXBP3O00186 592 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 KIF1CO43896 1103 aaKnown RBP15.53■□□□□ 0.08
COL16A1-214ENST00000488128 SERPING1P05155 500 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 SLC18A3Q16572 532 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 NAIF1Q69YI7 327 aaPredicted RBP15.53■□□□□ 0.08
COL16A1-214ENST00000488128 NBPF5PQ86XG9 351 aaPredicted RBP15.53■□□□□ 0.08
COL16A1-214ENST00000488128 NSUN4Q96CB9 384 aaKnown RBP15.53■□□□□ 0.08
COL16A1-214ENST00000488128 NLRP3Q96P20 1036 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 TSKSQ9UJT2 592 aa15.53■□□□□ 0.08
COL16A1-214ENST00000488128 DUOX1Q9NRD9 1551 aa15.52■□□□□ 0.08
COL16A1-214ENST00000488128 C21orf2O43822 256 aa15.52■□□□□ 0.08
COL16A1-214ENST00000488128 CAND2O75155 1236 aa15.52■□□□□ 0.08
COL16A1-214ENST00000488128 SHBGP04278 402 aa15.52■□□□□ 0.08
COL16A1-214ENST00000488128 PTK2Q05397 1052 aa15.52■□□□□ 0.08
COL16A1-214ENST00000488128 UBAP2Q5T6F2 1119 aaKnown RBP15.52■□□□□ 0.08
COL16A1-214ENST00000488128 METTL13Q8N6R0 699 aa15.52■□□□□ 0.08
COL16A1-214ENST00000488128 LARP4BQ92615 738 aaKnown RBP15.52■□□□□ 0.08
COL16A1-214ENST00000488128 UBA5Q9GZZ9 404 aa15.52■□□□□ 0.08
COL16A1-214ENST00000488128 CCDC113Q9H0I3 377 aa15.52■□□□□ 0.08
COL16A1-214ENST00000488128 MKNK2Q9HBH9 465 aa15.52■□□□□ 0.08
COL16A1-214ENST00000488128 NOC2LQ9Y3T9 749 aaKnown RBP15.52■□□□□ 0.08
COL16A1-214ENST00000488128 ARAP2Q8WZ64 1704 aa15.52■□□□□ 0.07
COL16A1-214ENST00000488128 SSU72P8A0A1W2PR75 194 aa15.52■□□□□ 0.07
COL16A1-214ENST00000488128 GCFC2P16383 781 aaKnown RBP15.52■□□□□ 0.07
COL16A1-214ENST00000488128 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.07
COL16A1-214ENST00000488128 USP17L2Q6R6M4 530 aa15.52■□□□□ 0.07
COL16A1-214ENST00000488128 AMIGO3Q86WK7 504 aa15.52■□□□□ 0.07
COL16A1-214ENST00000488128 ACTR5Q9H9F9 607 aaPredicted RBP15.52■□□□□ 0.07
COL16A1-214ENST00000488128 MYH7BA7E2Y1 1941 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 NPHP3-ACAD11A0A0J9YXS1 232 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 CCDC189A1A4V9 331 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 UPP2O95045 317 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 KIF4AO95239 1232 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 PEX19P40855 299 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 EPS15P42566 896 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 SLCO1A2P46721 670 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 EMC10Q5UCC4 262 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 TATDN2Q93075 761 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 FAXDC2Q96IV6 333 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 SETDB2Q96T68 719 aa15.51■□□□□ 0.07
COL16A1-214ENST00000488128 NOD2Q9HC29 1040 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms