RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 ITGA4P13612 1032 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 RASA1P20936 1047 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 HSPA9P38646 679 aaKnown RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 PTK2Q05397 1052 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 ZNF844Q08AG5 666 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 IFFO1Q0D2I5 559 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 PRPF4BQ13523 1007 aaKnown RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 GRIK5Q16478 980 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 TCERG1LQ5VWI1 586 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 CPLX4Q7Z7G2 160 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 MREGQ8N565 214 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 GPCPD1Q9NPB8 672 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 RIC8AQ9NPQ8 531 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 HAUS2Q9NVX0 235 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 DDX20Q9UHI6 824 aaKnown RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 A0A1B0GUL6 1792 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 ITGB4P16144 1822 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 PHF20L1A8MW92 1017 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 RAD21O60216 631 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 KIF4AO95239 1232 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 MAGOHP61326 146 aaKnown RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 UAP1Q16222 522 aaPredicted RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 SPRED3Q2MJR0 410 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 DCAF17Q5H9S7 520 aaPredicted RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 ZKSCAN4Q969J2 545 aaPredicted RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 MAGOHBQ96A72 148 aaKnown RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 LRRC45Q96CN5 670 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 CELF4Q9BZC1 486 aaKnown RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 NUCKS1Q9H1E3 243 aaKnown RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 ISCUQ9H1K1 167 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 GOPCQ9HD26 462 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 ANKIB1Q9P2G1 1089 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 PCDHGC5Q9Y5F6 944 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 RBAK-RBAKDNI3L0D1 243 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 CCDC172P0C7W6 258 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 PDHBP11177 359 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 ADCY7P51828 1080 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 ADAM9Q13443 819 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 E2F5Q15329 346 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 PAXIP1Q6ZW49 1069 aaPredicted RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 CD302Q8IX05 232 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 LRRC47Q8N1G4 583 aaKnown RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 LZTS2Q9BRK4 669 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 PLCB1Q9NQ66 1216 aa10.97□□□□□ -0.65
TMF1-203ENST00000488010 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 NOC2LQ9Y3T9 749 aaKnown RBP10.97□□□□□ -0.65
TMF1-203ENST00000488010 CHUKO15111 745 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 SLC9A1P19634 815 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 PEX26Q7Z412 305 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 CLEC10AQ8IUN9 316 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 MDM1Q8TC05 714 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 CEP95Q96GE4 821 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 MTMR9Q96QG7 549 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 SPZ1Q9BXG8 430 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 EDEM3Q9BZQ6 932 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 KIAA1024Q9UPX6 916 aa10.96□□□□□ -0.65
TMF1-203ENST00000488010 TTI1O43156 1089 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 BAG3O95817 575 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 DHX9Q08211 1270 aaKnown RBP10.96□□□□□ -0.66
TMF1-203ENST00000488010 COBLL1Q53SF7 1204 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 SPTY2D1Q68D10 685 aaPredicted RBP10.96□□□□□ -0.66
TMF1-203ENST00000488010 PPP4R3AQ6IN85 833 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 RUFY4Q6ZNE9 571 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 CNOT8Q9UFF9 292 aaKnown RBP10.96□□□□□ -0.66
TMF1-203ENST00000488010 ABCB11O95342 1321 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 TLDC2A0PJX2 215 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 PGRMC1O00264 195 aaKnown RBP10.96□□□□□ -0.66
TMF1-203ENST00000488010 CDK8P49336 464 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 KCNH2Q12809 1159 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 SF3B3Q15393 1217 aaKnown RBP10.96□□□□□ -0.66
TMF1-203ENST00000488010 ZNF571Q7Z3V5 609 aaPredicted RBP10.96□□□□□ -0.66
TMF1-203ENST00000488010 GPBP1Q86WP2 473 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 CACNA2D3Q8IZS8 1091 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 METTL13Q8N6R0 699 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 ATP8A1Q9Y2Q0 1164 aa10.96□□□□□ -0.66
TMF1-203ENST00000488010 ATXN2Q99700 1313 aaKnown RBP10.95□□□□□ -0.66
TMF1-203ENST00000488010 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 ECHS1P30084 290 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 COPB2P35606 906 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 SMTNP53814 917 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 GSCP56915 257 aaPredicted RBP10.95□□□□□ -0.66
TMF1-203ENST00000488010 PPP2R2AP63151 447 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 CUL1Q13616 776 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 DAAM2Q86T65 1068 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 PROM2Q8N271 834 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 RAPGEF5Q92565 580 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 SEC16BQ96JE7 1060 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 NLRP3Q96P20 1036 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 SELENOSQ9BQE4 189 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 LRRC4CQ9HCJ2 640 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 DNM1LO00429 736 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 NR2F2P24468 414 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 NF2P35240 595 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 FXR2P51116 673 aaKnown RBP eCLIP10.95□□□□□ -0.662e-10■■■■■ 45.7
TMF1-203ENST00000488010 PSMD2Q13200 908 aa10.95□□□□□ -0.66
TMF1-203ENST00000488010 ALKBH5Q6P6C2 394 aaKnown RBP10.95□□□□□ -0.66
TMF1-203ENST00000488010 YTHDF3Q7Z739 585 aaKnown RBP10.95□□□□□ -0.66
TMF1-203ENST00000488010 TRIM51Q9BSJ1 452 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms