RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TUBB4BP68371 445 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 PDXDC2PQ6P474 469 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 LDHDQ86WU2 507 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 GUF1Q8N442 669 aaKnown RBP14.49□□□□□ -0.09
HMGN1-216ENST00000486741 GIMAP8Q8ND71 665 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-216ENST00000486741 POMGNT1Q8WZA1 660 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 CEP170P1Q96L14 293 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 EXOC7Q9UPT5 735 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 USTQ9Y2C2 406 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 PDS5AQ29RF7 1337 aaKnown RBP14.49□□□□□ -0.09
HMGN1-216ENST00000486741 ATP2C2O75185 946 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 RHBDL3P58872 404 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 RNF187Q5TA31 235 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-216ENST00000486741 ATRIPQ8WXE1 791 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 RMDN3Q96TC7 470 aa14.49□□□□□ -0.09
HMGN1-216ENST00000486741 SEPT9Q9UHD8 586 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-216ENST00000486741 HNRNPDLO14979 420 aaKnown RBP14.48□□□□□ -0.09
HMGN1-216ENST00000486741 NMT1P30419 496 aaKnown RBP14.48□□□□□ -0.09
HMGN1-216ENST00000486741 PSMC2P35998 433 aaKnown RBP14.48□□□□□ -0.09
HMGN1-216ENST00000486741 PEX3P56589 373 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 PHLDB2Q86SQ0 1253 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 EIF2AK1Q9BQI3 630 aaKnown RBP14.48□□□□□ -0.09
HMGN1-216ENST00000486741 CSADQ9Y600 493 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 SEPT7Q16181 437 aaKnown RBP14.48□□□□□ -0.09
HMGN1-216ENST00000486741 KSR1Q8IVT5 923 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 WRNIP1Q96S55 665 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 ANKFY1Q9P2R3 1169 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 KCPQ6ZWJ8 1503 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 TUBBP07437 444 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 SHMT1P34896 483 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 BRD3Q15059 726 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 SHROOM1Q2M3G4 852 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-216ENST00000486741 NUDT12Q9BQG2 462 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 AS3MTQ9HBK9 375 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 NYAP2Q9P242 653 aa14.48□□□□□ -0.09
HMGN1-216ENST00000486741 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-216ENST00000486741 ZNF70Q9UC06 446 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-216ENST00000486741 IPO5O00410 1097 aaKnown RBP14.47□□□□□ -0.09
HMGN1-216ENST00000486741 NCK2O43639 380 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 DPEP1P16444 411 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 OTUD6AQ7L8S5 288 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 MPHOSPH6Q99547 160 aaKnown RBP14.47□□□□□ -0.09
HMGN1-216ENST00000486741 GOLGA6BA6NDN3 693 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 PDIA5Q14554 519 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 NYAP1Q6ZVC0 841 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 ZCCHC17Q9NP64 241 aaKnown RBP14.47□□□□□ -0.09
HMGN1-216ENST00000486741 GRB10Q13322 594 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 GNPTABQ3T906 1256 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 GSTA5Q7RTV2 222 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 FAM160B2Q86V87 743 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 METTL13Q8N6R0 699 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 DEPTORQ8TB45 409 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 C7orf25Q9BPX7 421 aa14.47□□□□□ -0.09
HMGN1-216ENST00000486741 NR3C1P04150 777 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 TRIM49P0CI25 452 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 TRIM49CP0CI26 452 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 TCP1P17987 556 aaKnown RBP14.46□□□□□ -0.09
HMGN1-216ENST00000486741 LIG4P49917 911 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 USP11P51784 963 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 MYL7Q01449 175 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 MTERF2Q49AM1 385 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 APOBEC3HQ6NTF7 200 aaKnown RBP14.46□□□□□ -0.09
HMGN1-216ENST00000486741 PPP1R18Q6NYC8 613 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 CCDC170Q8IYT3 715 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 KRT12Q99456 494 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 AZI2Q9H6S1 392 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 OPA1O60313 960 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 KRT19P08727 400 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 GUCY2DQ02846 1103 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 FUT2Q10981 343 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 PPP1R7Q15435 360 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 SLC15A2Q16348 729 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 RNF207Q6ZRF8 634 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 SAMD7Q7Z3H4 446 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 IQCDQ96DY2 449 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 CCDC114Q96M63 670 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 FAM20AQ96MK3 541 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 DPH5Q9H2P9 285 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 FAM184BQ9ULE4 1060 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 PACSIN2Q9UNF0 486 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-216ENST00000486741 DMP1Q13316 513 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-216ENST00000486741 MTMR1Q13613 665 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 GSPT2Q8IYD1 628 aaKnown RBP14.46□□□□□ -0.09
HMGN1-216ENST00000486741 CYP2W1Q8TAV3 490 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 PLVAPQ9BX97 442 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 ABCB6Q9NP58 842 aa14.46□□□□□ -0.09
HMGN1-216ENST00000486741 ACTN1P12814 892 aa14.46□□□□□ -0.1
HMGN1-216ENST00000486741 POLGP54098 1239 aaPredicted RBP14.46□□□□□ -0.1
HMGN1-216ENST00000486741 SULF1Q8IWU6 871 aa14.46□□□□□ -0.1
HMGN1-216ENST00000486741 REXO1L1PQ8IX06 675 aa14.46□□□□□ -0.1
HMGN1-216ENST00000486741 IFT20Q8IY31 132 aa14.46□□□□□ -0.1
HMGN1-216ENST00000486741 ZNF710Q8N1W2 664 aa14.46□□□□□ -0.1
HMGN1-216ENST00000486741 AGBL1Q96MI9 1066 aa14.46□□□□□ -0.1
HMGN1-216ENST00000486741 PRM3Q9NNZ6 103 aa14.46□□□□□ -0.1
HMGN1-216ENST00000486741 HERC5Q9UII4 1024 aaKnown RBP14.46□□□□□ -0.1
HMGN1-216ENST00000486741 KRIT1O00522 736 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 PNMA6AP0CW24 399 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 SARSP49591 514 aaKnown RBP14.45□□□□□ -0.1
HMGN1-216ENST00000486741 IGBP1P78318 339 aa14.45□□□□□ -0.1
HMGN1-216ENST00000486741 MDM2Q00987 491 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 468.7 ms