RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	MCM4	P33991	863 aa		5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	ULK2	Q8IYT8	1036 aa		5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	OR6P1	Q8NGX9	317 aa		5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	TOE1	Q96GM8	510 aa	Known RBP	5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	ZNF764	Q96H86	408 aa	Predicted RBP	5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	TRIM55	Q9BYV6	548 aa		5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	GINM1	Q9NU53	330 aa		5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	DTL	Q9NZJ0	730 aa		5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	SIRPG	Q9P1W8	387 aa		5.7	□□□□□ -1.5
VPS8-223	ENST00000485024	TLDC2	A0PJX2	215 aa		5.69	□□□□□ -1.5
VPS8-223	ENST00000485024	ZYX	Q15942	572 aa	Known RBP	5.69	□□□□□ -1.5
VPS8-223	ENST00000485024	TMC5	Q6UXY8	1006 aa		5.69	□□□□□ -1.5
VPS8-223	ENST00000485024	LRP10	Q7Z4F1	713 aa		5.69	□□□□□ -1.5
VPS8-223	ENST00000485024	ARRDC4	Q8NCT1	418 aa		5.69	□□□□□ -1.5
VPS8-223	ENST00000485024	BTG4	Q9NY30	223 aa		5.69	□□□□□ -1.5
VPS8-223	ENST00000485024	RBPJL	Q9UBG7	517 aa		5.69	□□□□□ -1.5
VPS8-223	ENST00000485024	SLC30A1	Q9Y6M5	507 aa		5.69	□□□□□ -1.5
VPS8-223	ENST00000485024	ARHGEF11	O15085	1522 aa		5.69	□□□□□ -1.5
VPS8-223	ENST00000485024	HECW2	Q9P2P5	1572 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	TRBV23OR9-2	A0A075B6M9	112 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	LRG1	P02750	347 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	FPR2	P25090	351 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	PHF19	Q5T6S3	580 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	GIMAP6	Q6P9H5	292 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	POLN	Q7Z5Q5	900 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	AJUBA	Q96IF1	538 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	FERD3L	Q96RJ6	166 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	ZNF408	Q9H9D4	720 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	CLEC1B	Q9P126	229 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	PRKAG3	Q9UGI9	489 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	PTPN22	Q9Y2R2	807 aa		5.68	□□□□□ -1.5
VPS8-223	ENST00000485024	EIF6	P56537	245 aa	Known RBP	5.67	□□□□□ -1.5
VPS8-223	ENST00000485024	PAPD7	Q5XG87	772 aa	Known RBP	5.67	□□□□□ -1.5
VPS8-223	ENST00000485024	CEP72	Q9P209	647 aa		5.67	□□□□□ -1.5
VPS8-223	ENST00000485024	INO80B-WBP1	J3KQ70	363 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	MASP2	O00187	686 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	C21orf58	P58505	322 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	TCEAL1	Q15170	157 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	ANKS3	Q6ZW76	656 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	RIOX2	Q8IUF8	465 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	IFNL2	Q8IZJ0	200 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	TAB3	Q8N5C8	712 aa	Predicted RBP	5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	FAM89A	Q96GI7	184 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	INO80B	Q9C086	356 aa	Predicted RBP	5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	SLC2A4RG	Q9NR83	387 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	WHRN	Q9P202	907 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	ZNF652	Q9Y2D9	606 aa		5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	REXO2	Q9Y3B8	237 aa	Known RBP	5.66	□□□□□ -1.5
VPS8-223	ENST00000485024	EIF4G1	Q04637	1599 aa	Known RBP	5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	GJA4	P35212	333 aa		5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	FSTL1	Q12841	308 aa		5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	DUSP8	Q13202	625 aa		5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	RAB33A	Q14088	237 aa		5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	BMS1	Q14692	1282 aa	Known RBP	5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	INF2	Q27J81	1249 aa		5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	COLEC12	Q5KU26	742 aa		5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	RPUSD2	Q8IZ73	545 aa	Known RBP	5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	ANAPC16	Q96DE5	110 aa		5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	TMX1	Q9H3N1	280 aa		5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	PTGFRN	Q9P2B2	879 aa		5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.65	□□□□□ -1.5
VPS8-223	ENST00000485024	TCRBV5S2	A0A599	114 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	PLS3	P13797	630 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	PROZ	P22891	400 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	ETFB	P38117	255 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	AMPD2	Q01433	879 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	MROH9	Q5TGP6	573 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	FBXW10	Q5XX13	1052 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	SDE2	Q6IQ49	451 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	GPR150	Q8NGU9	434 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	SRPK1	Q96SB4	655 aa	Known RBP	5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	MMP19	Q99542	508 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	CGGBP1	Q9UFW8	167 aa	Predicted RBP	5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	OAZ3	Q9UMX2	235 aa		5.64	□□□□□ -1.51
VPS8-223	ENST00000485024	BICRA	Q9NZM4	1560 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	ANKRD62	A6NC57	917 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	KLF4	O43474	513 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	KNG1	P01042	644 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	ZNF888	P0CJ79	500 aa	Predicted RBP	5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	GIPR	P48546	466 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	KRTAP10-6	P60371	365 aa	Predicted RBP	5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	RAC3	P60763	192 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	SERINC3	Q13530	473 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	UNC5A	Q6ZN44	842 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	NLRP10	Q86W26	655 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	PROSER1	Q86XN7	944 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	PRIMA1	Q86XR5	153 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	SHD	Q96IW2	340 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	OR14A2	Q96R54	314 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	HAUS7	Q99871	368 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	DPYSL5	Q9BPU6	564 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	KLHL25	Q9H0H3	589 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	ACTR10	Q9NZ32	417 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	ZNF214	Q9UL59	606 aa	Predicted RBP	5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	ZNRF3	Q9ULT6	936 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	SLC12A7	Q9Y666	1083 aa		5.63	□□□□□ -1.51
VPS8-223	ENST00000485024	MRVI1	Q9Y6F6	885 aa		5.63	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms