RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 RSPO4Q2I0M5 234 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-207ENST00000483969 SLC9C1Q4G0N8 1177 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 TMEM67Q5HYA8 995 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 IER5Q5VY09 327 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 BTNL9Q6UXG8 535 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 C20orf204Q6ZNR8 217 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 STOX1Q6ZVD7 989 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 BTLAQ7Z6A9 289 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 NCAPG2Q86XI2 1143 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 MB21D2Q8IYB1 491 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-207ENST00000483969 CPXCR1Q8N123 301 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 BHMTQ93088 406 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 TMEM87BQ96K49 555 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 C2orf49Q9BVC5 232 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-207ENST00000483969 TEX13BQ9BXU2 312 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 SLC38A10Q9HBR0 1119 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 SLC5A4Q9NY91 659 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 BIN2Q9UBW5 565 aaPredicted RBP10.39□□□□□ -0.75
COL8A1-207ENST00000483969 PNMA2Q9UL42 364 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 GABRQQ9UN88 632 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 TAF6LQ9Y6J9 622 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 MYH7P12883 1935 aa10.39□□□□□ -0.75
COL8A1-207ENST00000483969 CDK5RAP2Q96SN8 1893 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 FAM229AH3BQW9 127 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 PRC1O43663 620 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 ADCY3O60266 1144 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 PARP1P09874 1014 aaKnown RBP10.38□□□□□ -0.75
COL8A1-207ENST00000483969 SNHG28P0DPA3 235 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 FCER1AP12319 257 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 XRCC5P13010 732 aaKnown RBP10.38□□□□□ -0.75
COL8A1-207ENST00000483969 CYP2B6P20813 491 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 PSMA5P28066 241 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 GRK4P32298 578 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 HSPA4P34932 840 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 RGS2P41220 211 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 UBXN2AP68543 259 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 ASPRV1Q53RT3 343 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 SYDE2Q5VT97 1194 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 C8orf86Q6ZUL3 223 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 DHX32Q7L7V1 743 aaKnown RBP10.38□□□□□ -0.75
COL8A1-207ENST00000483969 CHST3Q7LGC8 479 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 CATIPQ7Z7H3 387 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 DPP9Q86TI2 863 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 ABRAQ8N0Z2 381 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 REPS2Q8NFH8 660 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 IGDCC4Q8TDY8 1250 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 KCNB2Q92953 911 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 UBE2OQ9C0C9 1292 aaKnown RBP10.38□□□□□ -0.75
COL8A1-207ENST00000483969 RAVER2Q9HCJ3 691 aaKnown RBP10.38□□□□□ -0.75
COL8A1-207ENST00000483969 TPSG1Q9NRR2 321 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 FBXO40Q9UH90 709 aa10.38□□□□□ -0.75
COL8A1-207ENST00000483969 FRMPD2Q68DX3 1309 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-207ENST00000483969 CCDC69A6NI79 296 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 SLC16A2P36021 539 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 LIFRP42702 1097 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 SEC13P55735 322 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 KCTD2Q14681 263 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 TKFCQ3LXA3 575 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 NKAPLQ5M9Q1 402 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 SNRNP48Q6IEG0 339 aaKnown RBP10.37□□□□□ -0.75
COL8A1-207ENST00000483969 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 SYNE3Q6ZMZ3 975 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 NFXL1Q6ZNB6 911 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 CHST13Q8NET6 341 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 ARMC5Q96C12 935 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 USP26Q9BXU7 913 aa10.37□□□□□ -0.75
COL8A1-207ENST00000483969 ZNF214Q9UL59 606 aaPredicted RBP10.37□□□□□ -0.75
COL8A1-207ENST00000483969 WDR19Q8NEZ3 1342 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 GOLGA8HP0CJ92 632 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 CALM1P0DP23 149 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 CALM2P0DP24 149 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 CALM3P0DP25 149 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 ANTXR2P58335 489 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 FGD1P98174 961 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 EXOSC10Q01780 885 aaKnown RBP10.36□□□□□ -0.75
COL8A1-207ENST00000483969 GRB14Q14449 540 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 SH3TC2Q8TF17 1288 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 SCG3Q8WXD2 468 aaKnown RBP10.36□□□□□ -0.75
COL8A1-207ENST00000483969 USP6NLQ92738 828 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 DDX11Q96FC9 970 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 MMP19Q99542 508 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 MAP3K14Q99558 947 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 UBA5Q9GZZ9 404 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 RANBP17Q9H2T7 1088 aaKnown RBP10.36□□□□□ -0.75
COL8A1-207ENST00000483969 SLC6A14Q9UN76 642 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 SNX14Q9Y5W7 946 aa10.36□□□□□ -0.75
COL8A1-207ENST00000483969 PHIPQ8WWQ0 1821 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 BAZ2AQ9UIF9 1905 aaKnown RBP10.35□□□□□ -0.75
COL8A1-207ENST00000483969 KLRF2D3W0D1 207 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 SH2B2O14492 632 aaPredicted RBP10.35□□□□□ -0.75
COL8A1-207ENST00000483969 DHX16O60231 1041 aaKnown RBP10.35□□□□□ -0.75
COL8A1-207ENST00000483969 ICAM1P05362 532 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 HOXC6P09630 235 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 ADORA2AP29274 412 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 KIF5BP33176 963 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 GNAQP50148 359 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 TRAF1Q13077 416 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 RTN1Q16799 776 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 CCDC174Q6PII3 467 aa10.35□□□□□ -0.75
COL8A1-207ENST00000483969 BLOC1S2Q6QNY1 142 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms