RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 NGRNQ9NPE2 291 aaKnown RBP12.47□□□□□ -0.41
TRIM27-205ENST00000481474 ZNF532Q9HCE3 1301 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 CFAP65Q6ZU64 1925 aaKnown RBP12.47□□□□□ -0.41
TRIM27-205ENST00000481474 F8W8V4 182 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 BPIFB4P59827 614 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 SYCP2LQ5T4T6 812 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 IL31Q6EBC2 164 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 KLHL24Q6TFL4 600 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 KSR2Q6VAB6 950 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 ZNF280CQ8ND82 737 aa12.47□□□□□ -0.41
TRIM27-205ENST00000481474 MTIF3Q9H2K0 278 aaKnown RBP12.47□□□□□ -0.41
TRIM27-205ENST00000481474 CLUP10909 449 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 P3H4Q92791 437 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 SP110Q9HB58 689 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 EPS15L1Q9UBC2 864 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 CAVIN2O95810 425 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 PPARGP37231 505 aaPredicted RBP12.46□□□□□ -0.41
TRIM27-205ENST00000481474 ERAP2Q6P179 960 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 ADD3Q9UEY8 706 aaKnown RBP12.46□□□□□ -0.41
TRIM27-205ENST00000481474 NDOR1Q9UHB4 597 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 SERTAD1Q9UHV2 236 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 RAB23Q9ULC3 237 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 USP17L12C9JPN9 530 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 USP17L21D6R901 530 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 NSFP46459 744 aaKnown RBP12.46□□□□□ -0.41
TRIM27-205ENST00000481474 VEPH1Q14D04 833 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 NT5DC4Q86YG4 428 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 NFKBIZQ9BYH8 718 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 SCOCQ9UIL1 159 aa12.46□□□□□ -0.41
TRIM27-205ENST00000481474 EIF3CLB5ME19 914 aaKnown RBP12.46□□□□□ -0.42
TRIM27-205ENST00000481474 PJA2O43164 708 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 RAB42Q8N4Z0 105 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 TDRD7Q8NHU6 1098 aaKnown RBP12.46□□□□□ -0.42
TRIM27-205ENST00000481474 SEPT5Q99719 369 aaPredicted RBP12.46□□□□□ -0.42
TRIM27-205ENST00000481474 CYP7B1O75881 506 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 CHEK2O96017 543 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 RASIP1Q5U651 963 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 LAYNQ6UX15 382 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 SCYL3Q8IZE3 742 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 REXO4Q9GZR2 422 aaKnown RBP12.46□□□□□ -0.42
TRIM27-205ENST00000481474 USE1Q9NZ43 259 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 PCDHA5Q9Y5H7 936 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 HEY1Q9Y5J3 304 aa12.46□□□□□ -0.42
TRIM27-205ENST00000481474 GOLGA8MH3BSY2 632 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 KRT14P02533 472 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 AKAP5P24588 427 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 TMED2Q15363 201 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 SPATS2LQ9NUQ6 558 aaKnown RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 GIMAP4Q9NUV9 329 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 BCAP29Q9UHQ4 241 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 PALD1Q9ULE6 856 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 PAIP2BQ9ULR5 123 aaKnown RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 ZNF233A6NK53 670 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 TNPO2O14787 897 aaKnown RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 TADA2AO75478 443 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 HSPA6P17066 643 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 DNAJC10Q8IXB1 793 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 JADE3Q92613 823 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 PMM1Q92871 262 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 STRIP2Q9ULQ0 834 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 CCDC195A0A1B0GUA6 201 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 TRIM27P14373 513 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 GUCA1AP43080 201 aaPredicted RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 MYL7Q01449 175 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 USPL1Q5W0Q7 1092 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 RNF207Q6ZRF8 634 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 A0A087X0T9 212 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 SFI1A8K8P3 1242 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 HSPA1AP0DMV8 641 aaKnown RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 HSPA1BP0DMV9 641 aaKnown RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 SOAT1P35610 550 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 R3HDM1Q15032 1099 aaKnown RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 ADORA2BP29275 332 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 NAALADL2Q58DX5 795 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 KLC3Q6P597 504 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 CYP26C1Q6V0L0 522 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 ZSCAN18Q8TBC5 510 aaPredicted RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 MAGED4Q96JG8 741 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 PARVBQ9HBI1 364 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 PAXBP1Q9Y5B6 917 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 KRT1P04264 644 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 ATP1A1P05023 1023 aaKnown RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 ACADMP11310 421 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 EVCP57679 992 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 INAQ16352 499 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 AKAP4Q5JQC9 854 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 MAML1Q92585 1016 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 CABS1Q96KC9 395 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 NAPGQ99747 312 aaPredicted RBP12.45□□□□□ -0.42
TRIM27-205ENST00000481474 CCT7Q99832 543 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 AIPL1Q9NZN9 384 aa12.45□□□□□ -0.42
TRIM27-205ENST00000481474 PRPSAP2O60256 369 aa12.44□□□□□ -0.42
TRIM27-205ENST00000481474 MAP4P27816 1152 aaKnown RBP12.44□□□□□ -0.42
TRIM27-205ENST00000481474 RNASE11Q8TAA1 199 aaKnown RBP12.44□□□□□ -0.42
TRIM27-205ENST00000481474 RUBCNLQ9H714 662 aa12.44□□□□□ -0.42
TRIM27-205ENST00000481474 POLD4Q9HCU8 107 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms