RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 UBXN1Q04323 297 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 PSMD2Q13200 908 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 TBC1D10BQ4KMP7 808 aaPredicted RBP18.6■□□□□ 0.57
SH3D21-203ENST00000480549 TOGARAM2Q6ZUX3 1019 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 CATSPER3Q86XQ3 398 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 CNOT7Q9UIV1 285 aaKnown RBP18.6■□□□□ 0.57
SH3D21-203ENST00000480549 HACL1Q9UJ83 578 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 PPP2R2CQ9Y2T4 447 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 MRPL11Q9Y3B7 192 aaKnown RBP18.6■□□□□ 0.57
SH3D21-203ENST00000480549 RNF225M0QZC1 329 aaPredicted RBP18.6■□□□□ 0.57
SH3D21-203ENST00000480549 COASYQ13057 564 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 LDHDQ86WU2 507 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 MB21D1Q8N884 522 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 GLIS3Q8NEA6 775 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 EEF2KMTQ96G04 330 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 PARP14Q460N5 1801 aa18.6■□□□□ 0.57
SH3D21-203ENST00000480549 ZNF536O15090 1300 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 ABCB11O95342 1321 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 POTEFA5A3E0 1075 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 POTEIP0CG38 1075 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 SPATA31C1P0DKV0 1188 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 HOXA7P31268 230 aaPredicted RBP18.59■□□□□ 0.57
SH3D21-203ENST00000480549 HAUS3Q68CZ6 603 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 POTEGQ6S5H5 508 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 POTEEQ6S8J3 1075 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 WDR18Q9BV38 432 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 GJA3Q9Y6H8 435 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 UTRNP46939 3433 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 CCDC189A1A4V9 331 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 SLC12A3P55017 1021 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 NCAPH2Q6IBW4 605 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 CNGA4Q8IV77 575 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 CNOT6LQ96LI5 555 aaKnown RBP18.59■□□□□ 0.57
SH3D21-203ENST00000480549 ARFGAP3Q9NP61 516 aa18.59■□□□□ 0.57
SH3D21-203ENST00000480549 MAGEC2Q9UBF1 373 aaPredicted RBP18.59■□□□□ 0.57
SH3D21-203ENST00000480549 RPA1P27694 616 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 TUBGCP2Q9BSJ2 902 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 DEFB129Q9H1M3 183 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 ZNF541Q9H0D2 1346 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 A0A1W2PQC6 194 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 SOWAHDA6NJG2 315 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 CYP11B2P19099 503 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 MTF1Q14872 753 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 FAM43BQ6ZT52 329 aaPredicted RBP18.58■□□□□ 0.57
SH3D21-203ENST00000480549 RPAINQ86UA6 219 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 CCDC51Q96ER9 411 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 SGSM3Q96HU1 749 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 NAA15Q9BXJ9 866 aaKnown RBP18.58■□□□□ 0.57
SH3D21-203ENST00000480549 KIAA1683Q9H0B3 1180 aa18.58■□□□□ 0.57
SH3D21-203ENST00000480549 WDR46O15213 610 aaKnown RBP18.58■□□□□ 0.56
SH3D21-203ENST00000480549 NKRFO15226 690 aaKnown RBP eCLIP18.58■□□□□ 0.567e-7■■□□□ 12.1
SH3D21-203ENST00000480549 ZNF76P36508 570 aa18.58■□□□□ 0.56
SH3D21-203ENST00000480549 DGKZQ13574 1117 aa18.58■□□□□ 0.56
SH3D21-203ENST00000480549 TRIM14Q14142 442 aa18.58■□□□□ 0.56
SH3D21-203ENST00000480549 LRCH2Q5VUJ6 765 aa18.58■□□□□ 0.56
SH3D21-203ENST00000480549 TRIM65Q6PJ69 517 aa18.58■□□□□ 0.56
SH3D21-203ENST00000480549 CEP89Q96ST8 783 aa18.58■□□□□ 0.56
SH3D21-203ENST00000480549 PANK4Q9NVE7 773 aa18.58■□□□□ 0.56
SH3D21-203ENST00000480549 PCDHA2Q9Y5H9 948 aa18.58■□□□□ 0.56
SH3D21-203ENST00000480549 ZSCAN12O43309 604 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 CTNND1O60716 968 aaKnown RBP18.57■□□□□ 0.56
SH3D21-203ENST00000480549 TADA3O75528 432 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 SSBP05455 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
SH3D21-203ENST00000480549 KIF4BQ2VIQ3 1234 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 ARSHQ5FYA8 562 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 RAD9BQ6WBX8 426 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 GPBP1Q86WP2 473 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 FAM114A1Q8IWE2 563 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 GINM1Q9NU53 330 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 NPHP3-ACAD11A0A0J9YXS1 232 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 IRF6O14896 467 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 ICAM1P05362 532 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 PSMC6P62333 389 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 LRRC41Q15345 812 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 MIIPQ5JXC2 388 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 NLGN2Q8NFZ4 835 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 ERMNQ8TAM6 284 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 LPAR1Q92633 364 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 AGBL1Q96MI9 1066 aa18.57■□□□□ 0.56
SH3D21-203ENST00000480549 FRMD3A2A2Y4 597 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 B4DLN1 442 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 NBPF12Q5TAG4 269 aaPredicted RBP18.56■□□□□ 0.56
SH3D21-203ENST00000480549 FGFBP2Q9BYJ0 223 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 ABHD10Q9NUJ1 306 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 EML1O00423 815 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 TUBB4AP04350 444 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 FOXR2Q6PJQ5 311 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 CEP120Q8N960 986 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 BMP2KQ9NSY1 1161 aaPredicted RBP18.56■□□□□ 0.56
SH3D21-203ENST00000480549 STK24Q9Y6E0 443 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 DNM2P50570 870 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 HSD17B4P51659 736 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 UBXN2AP68543 259 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 LRRC63Q05C16 580 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 FAM26FQ5R3K3 315 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 SLF1Q9BQI6 1058 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 DESI2Q9BSY9 194 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 FUT8Q9BYC5 575 aa18.56■□□□□ 0.56
SH3D21-203ENST00000480549 TPM1P09493 284 aa18.55■□□□□ 0.56
SH3D21-203ENST00000480549 ETF1P62495 437 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms