RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	NUP133	Q8WUM0	1156 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	BRF1	Q92994	677 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	RRP36	Q96EU6	259 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	WNT8A	Q9H1J5	351 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	RIC8A	Q9NPQ8	531 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	ISY1	Q9ULR0	285 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	RALGAPA2	Q2PPJ7	1873 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	NLRC5	Q86WI3	1866 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	IGLV3-22	A0A075B6J6	115 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	hCG_1984214	I3L0E3	225 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	PRPF3	O43395	683 aa	Known RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	B4GALT4	O60513	344 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	F2	P00734	622 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CFB	P00751	764 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CLTB	P09497	229 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	C6orf222	P0C671	652 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	POLR2M	P0CAP2	368 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	IFNAR1	P17181	557 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	ITGB5	P18084	799 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CAST	P20810	708 aa	Known RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	PSMC6	P62333	389 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	ADAM17	P78536	824 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	UBE2S	Q16763	222 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	TCTN1	Q2MV58	587 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	LRIT3	Q3SXY7	679 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CELF3	Q5SZQ8	465 aa	Known RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	MYSM1	Q5VVJ2	828 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CXCL17	Q6UXB2	119 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZNF713	Q8N859	430 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	PCSK9	Q8NBP7	692 aa	Known RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	PPTC7	Q8NI37	304 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	DPF3	Q92784	378 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	WNT8B	Q93098	351 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	LENG9	Q96B70	501 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	C16orf70	Q9BSU1	422 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	NOC4L	Q9BVI4	516 aa	Known RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	REPIN1	Q9BWE0	567 aa	Known RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	UMODL1	Q5DID0	1318 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	GOLGA8A	A7E2F4	631 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	GOLGA8B	A8MQT2	603 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	DYNC1LI2	O43237	492 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CABYR	O75952	493 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	NEFL	P07196	543 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CENPB	P07199	599 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	PPP2R5B	Q15173	497 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	STXBP2	Q15833	593 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	C9orf50	Q5SZB4	431 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	XRRA1	Q6P2D8	792 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	BLOC1S2	Q6QNY1	142 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	PARP9	Q8IXQ6	854 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	OR6J1	Q8NGC5	347 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZNF274	Q96GC6	653 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZMYND12	Q9H0C1	365 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	STARD7	Q9NQZ5	370 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	ATP11B	Q9Y2G3	1177 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	NR2E3	Q9Y5X4	410 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	TRANK1	O15050	2925 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CHD7	Q9P2D1	2997 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	STK36	Q9NRP7	1315 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	STAM2	O75886	525 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CYP3A4	P08684	503 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	CCND2	P30279	289 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	SREBF1	P36956	1147 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	PTPN11	Q06124	597 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	TTLL4	Q14679	1199 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	HSDL1	Q3SXM5	330 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	ARHGEF16	Q5VV41	709 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	AFG1L	Q8WV93	481 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	MBOAT7	Q96N66	472 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	PCYT2	Q99447	389 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	RNF26	Q9BY78	433 aa	Predicted RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	SEZ6L	Q9BYH1	1024 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	NCOA5	Q9HCD5	579 aa	Known RBP	4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	TPCN1	Q9ULQ1	816 aa		4.88	□□□□□ -1.63
POLR2B-208	ENST00000478188	RNF223	E7ERA6	249 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	DHX15	O43143	795 aa	Known RBP	4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	PFKFB2	O60825	505 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	ATP9A	O75110	1047 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	TIMP1	P01033	207 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	GH1	P01241	217 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	TXN	P10599	105 aa	Known RBP	4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	SCG2	P13521	617 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	FDPS	P14324	419 aa	Known RBP	4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	CPT1A	P50416	773 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	METAP2	P50579	478 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	SCRN1	Q12765	414 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	ITGA7	Q13683	1181 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	GNAS	Q5JWF2	1037 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	NFRKB	Q6P4R8	1299 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	B3GNT9	Q6UX72	402 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	NFXL1	Q6ZNB6	911 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	DAGLB	Q8NCG7	672 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	BAD	Q92934	168 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	TNFRSF25	Q93038	417 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	GPR20	Q99678	358 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	MTG1	Q9BT17	334 aa	Predicted RBP	4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	TRPV6	Q9H1D0	765 aa		4.87	□□□□□ -1.63
POLR2B-208	ENST00000478188	POLR3E	Q9NVU0	708 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms