RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 JADE2Q9NQC1 790 aa8.83□□□□□ -1
VMA21-203ENST00000477649 PANK4Q9NVE7 773 aa8.83□□□□□ -1
VMA21-203ENST00000477649 FBXO28Q9NVF7 368 aa8.83□□□□□ -1
VMA21-203ENST00000477649 RNF181Q9P0P0 153 aa8.83□□□□□ -1
VMA21-203ENST00000477649 SEL1LQ9UBV2 794 aa8.83□□□□□ -1
VMA21-203ENST00000477649 FBXO40Q9UH90 709 aa8.83□□□□□ -1
VMA21-203ENST00000477649 TCEAL9Q9UHQ7 104 aa8.83□□□□□ -1
VMA21-203ENST00000477649 GDAQ9Y2T3 454 aa8.83□□□□□ -1
VMA21-203ENST00000477649 AFG3L2Q9Y4W6 797 aa8.83□□□□□ -1
VMA21-203ENST00000477649 ZHX2Q9Y6X8 837 aa8.83□□□□□ -1
VMA21-203ENST00000477649 LGALS16A8MUM7 142 aa8.82□□□□□ -1
VMA21-203ENST00000477649 AKR1B15C9JRZ8 316 aaPredicted RBP8.82□□□□□ -1
VMA21-203ENST00000477649 IPO5O00410 1097 aaKnown RBP8.82□□□□□ -1
VMA21-203ENST00000477649 CXCL11O14625 94 aa8.82□□□□□ -1
VMA21-203ENST00000477649 ZSCAN12O43309 604 aa8.82□□□□□ -1
VMA21-203ENST00000477649 LYPLA2O95372 231 aa8.82□□□□□ -1
VMA21-203ENST00000477649 KRT18P05783 430 aaKnown RBP8.82□□□□□ -1
VMA21-203ENST00000477649 SPATA31C1P0DKV0 1188 aa8.82□□□□□ -1
VMA21-203ENST00000477649 ALAS1P13196 640 aa8.82□□□□□ -1
VMA21-203ENST00000477649 IDEP14735 1019 aa8.82□□□□□ -1
VMA21-203ENST00000477649 CYP11B2P19099 503 aa8.82□□□□□ -1
VMA21-203ENST00000477649 SFNP31947 248 aa8.82□□□□□ -1
VMA21-203ENST00000477649 EPS15P42566 896 aa8.82□□□□□ -1
VMA21-203ENST00000477649 COPB1P53618 953 aaKnown RBP8.82□□□□□ -1
VMA21-203ENST00000477649 FKBP3Q00688 224 aaKnown RBP8.82□□□□□ -1
VMA21-203ENST00000477649 PPATQ06203 517 aa8.82□□□□□ -1
VMA21-203ENST00000477649 LRMPQ12912 555 aa8.82□□□□□ -1
VMA21-203ENST00000477649 STK4Q13043 487 aa8.82□□□□□ -1
VMA21-203ENST00000477649 COASYQ13057 564 aa8.82□□□□□ -1
VMA21-203ENST00000477649 KRT31Q15323 416 aa8.82□□□□□ -1
VMA21-203ENST00000477649 FIGNQ5HY92 759 aa8.82□□□□□ -1
VMA21-203ENST00000477649 NCAPH2Q6IBW4 605 aa8.82□□□□□ -1
VMA21-203ENST00000477649 ARMCX5Q6P1M9 558 aa8.82□□□□□ -1
VMA21-203ENST00000477649 B3GNT9Q6UX72 402 aa8.82□□□□□ -1
VMA21-203ENST00000477649 RNF207Q6ZRF8 634 aa8.82□□□□□ -1
VMA21-203ENST00000477649 CATSPERGQ6ZRH7 1159 aa8.82□□□□□ -1
VMA21-203ENST00000477649 NLRX1Q86UT6 975 aa8.82□□□□□ -1
VMA21-203ENST00000477649 GPBP1Q86WP2 473 aa8.82□□□□□ -1
VMA21-203ENST00000477649 SMYD4Q8IYR2 804 aaPredicted RBP8.82□□□□□ -1
VMA21-203ENST00000477649 PROCA1Q8NCQ7 364 aaPredicted RBP8.82□□□□□ -1
VMA21-203ENST00000477649 SLC17A8Q8NDX2 589 aa8.82□□□□□ -1
VMA21-203ENST00000477649 CHST13Q8NET6 341 aa8.82□□□□□ -1
VMA21-203ENST00000477649 SYTL5Q8TDW5 730 aaPredicted RBP8.82□□□□□ -1
VMA21-203ENST00000477649 AGBL1Q96MI9 1066 aa8.82□□□□□ -1
VMA21-203ENST00000477649 TRERF1Q96PN7 1200 aa8.82□□□□□ -1
VMA21-203ENST00000477649 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
VMA21-203ENST00000477649 EIF2AK1Q9BQI3 630 aaKnown RBP8.82□□□□□ -1
VMA21-203ENST00000477649 SRRTQ9BXP5 876 aaKnown RBP8.82□□□□□ -1
VMA21-203ENST00000477649 INTS13Q9NVM9 706 aa8.82□□□□□ -1
VMA21-203ENST00000477649 PYCARDQ9ULZ3 195 aa8.82□□□□□ -1
VMA21-203ENST00000477649 PAXBP1Q9Y5B6 917 aa8.82□□□□□ -1
VMA21-203ENST00000477649 COL4A3BPQ9Y5P4 624 aa8.82□□□□□ -1
VMA21-203ENST00000477649 UBIAD1Q9Y5Z9 338 aa8.82□□□□□ -1
VMA21-203ENST00000477649 ATAD5Q96QE3 1844 aa8.82□□□□□ -1
VMA21-203ENST00000477649 MYH7BA7E2Y1 1941 aa8.82□□□□□ -1
VMA21-203ENST00000477649 ASTN2O75129 1339 aaPredicted RBP8.81□□□□□ -1
VMA21-203ENST00000477649 UBE4BO95155 1302 aa8.81□□□□□ -1
VMA21-203ENST00000477649 IQCA1LA6NCM1 817 aa8.81□□□□□ -1
VMA21-203ENST00000477649 POTECB2RU33 542 aa8.81□□□□□ -1
VMA21-203ENST00000477649 B4DLN1 442 aa8.81□□□□□ -1
VMA21-203ENST00000477649 GRIN3BO60391 1043 aa8.81□□□□□ -1
VMA21-203ENST00000477649 TBCAO75347 108 aaKnown RBP8.81□□□□□ -1
VMA21-203ENST00000477649 MED24O75448 989 aa8.81□□□□□ -1
VMA21-203ENST00000477649 USP2O75604 605 aaPredicted RBP8.81□□□□□ -1
VMA21-203ENST00000477649 P4HBP07237 508 aaKnown RBP8.81□□□□□ -1
VMA21-203ENST00000477649 JAK3P52333 1124 aa8.81□□□□□ -1
VMA21-203ENST00000477649 HIRAP54198 1017 aaPredicted RBP8.81□□□□□ -1
VMA21-203ENST00000477649 KRT76Q01546 638 aa8.81□□□□□ -1
VMA21-203ENST00000477649 PPP2R3AQ06190 1150 aa8.81□□□□□ -1
VMA21-203ENST00000477649 PABPC4Q13310 644 aaKnown RBP eCLIP8.81□□□□□ -16e-8■■■□□ 15.2
VMA21-203ENST00000477649 ALCAMQ13740 583 aa8.81□□□□□ -1
VMA21-203ENST00000477649 EDRF1Q3B7T1 1238 aa8.81□□□□□ -1
VMA21-203ENST00000477649 HERC4Q5GLZ8 1057 aaPredicted RBP8.81□□□□□ -1
VMA21-203ENST00000477649 FKBP15Q5T1M5 1219 aa8.81□□□□□ -1
VMA21-203ENST00000477649 LBX2Q6XYB7 198 aa8.81□□□□□ -1
VMA21-203ENST00000477649 CCDC84Q86UT8 332 aaPredicted RBP8.81□□□□□ -1
VMA21-203ENST00000477649 ANKRD13AQ8IZ07 590 aa8.81□□□□□ -1
VMA21-203ENST00000477649 CPXCR1Q8N123 301 aa8.81□□□□□ -1
VMA21-203ENST00000477649 KIAA0895Q8NCT3 520 aa8.81□□□□□ -1
VMA21-203ENST00000477649 REPS2Q8NFH8 660 aa8.81□□□□□ -1
VMA21-203ENST00000477649 NSUN6Q8TEA1 469 aaKnown RBP8.81□□□□□ -1
VMA21-203ENST00000477649 LRRC15Q8TF66 581 aa8.81□□□□□ -1
VMA21-203ENST00000477649 GPRASP2Q96D09 838 aa8.81□□□□□ -1
VMA21-203ENST00000477649 IWS1Q96ST2 819 aa8.81□□□□□ -1
VMA21-203ENST00000477649 BAG1Q99933 345 aaPredicted RBP8.81□□□□□ -1
VMA21-203ENST00000477649 ACAD9Q9H845 621 aa8.81□□□□□ -1
VMA21-203ENST00000477649 RAVER2Q9HCJ3 691 aaKnown RBP8.81□□□□□ -1
VMA21-203ENST00000477649 OLFML3Q9NRN5 406 aa8.81□□□□□ -1
VMA21-203ENST00000477649 RNF146Q9NTX7 359 aa8.81□□□□□ -1
VMA21-203ENST00000477649 KCNG1Q9UIX4 513 aa8.81□□□□□ -1
VMA21-203ENST00000477649 ODF2LQ9ULJ1 636 aa8.81□□□□□ -1
VMA21-203ENST00000477649 E9PMD0 336 aa8.8□□□□□ -1
VMA21-203ENST00000477649 NFIBO00712 420 aa8.8□□□□□ -1
VMA21-203ENST00000477649 EIF3DO15371 548 aaKnown RBP eCLIP8.8□□□□□ -1
VMA21-203ENST00000477649 DDNO94850 711 aaPredicted RBP8.8□□□□□ -1
VMA21-203ENST00000477649 SLITRK3O94933 977 aa8.8□□□□□ -1
VMA21-203ENST00000477649 SSBP05455 408 aaKnown RBP eCLIP8.8□□□□□ -1
VMA21-203ENST00000477649 MAPTP10636 758 aaKnown RBP8.8□□□□□ -1
VMA21-203ENST00000477649 FECHP22830 423 aa8.8□□□□□ -1
VMA21-203ENST00000477649 RPL13P26373 211 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms