RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 DTX3Q8N9I9 347 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 NUDT10Q8NFP7 164 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 SH3RF2Q8TEC5 729 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 NUDT11Q96G61 164 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 LOXL4Q96JB6 756 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 RBM15Q96T37 977 aaKnown RBP eCLIP7.01□□□□□ -1.29
VPS50-213ENST00000477572 CATSPERZQ9NTU4 200 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 PCDHA9Q9Y5H5 950 aa7.01□□□□□ -1.29
VPS50-213ENST00000477572 ACOT7O00154 380 aa7□□□□□ -1.29
VPS50-213ENST00000477572 KCNK3O14649 394 aa7□□□□□ -1.29
VPS50-213ENST00000477572 FBXO21O94952 628 aa7□□□□□ -1.29
VPS50-213ENST00000477572 SUMO1P63165 101 aaKnown RBP7□□□□□ -1.29
VPS50-213ENST00000477572 PFKPQ01813 784 aa7□□□□□ -1.29
VPS50-213ENST00000477572 ZNF827Q17R98 1081 aa7□□□□□ -1.29
VPS50-213ENST00000477572 NBPF6Q5VWK0 638 aa7□□□□□ -1.29
VPS50-213ENST00000477572 CD276Q5ZPR3 534 aa7□□□□□ -1.29
VPS50-213ENST00000477572 ARHGAP36Q6ZRI8 547 aa7□□□□□ -1.29
VPS50-213ENST00000477572 DPH6Q7L8W6 267 aa7□□□□□ -1.29
VPS50-213ENST00000477572 OSTM1Q86WC4 334 aa7□□□□□ -1.29
VPS50-213ENST00000477572 STPG3Q8N7X2 389 aa7□□□□□ -1.29
VPS50-213ENST00000477572 PCDH19Q8TAB3 1148 aa7□□□□□ -1.29
VPS50-213ENST00000477572 PTPRN2Q92932 1015 aa7□□□□□ -1.29
VPS50-213ENST00000477572 MBD6Q96DN6 1003 aa7□□□□□ -1.29
VPS50-213ENST00000477572 NBPF4Q96M43 638 aa7□□□□□ -1.29
VPS50-213ENST00000477572 C8orf37Q96NL8 207 aa7□□□□□ -1.29
VPS50-213ENST00000477572 DEPDC7Q96QD5 511 aa7□□□□□ -1.29
VPS50-213ENST00000477572 HIRIP3Q9BW71 556 aaPredicted RBP7□□□□□ -1.29
VPS50-213ENST00000477572 DLL4Q9NR61 685 aa7□□□□□ -1.29
VPS50-213ENST00000477572 ZFP69BQ9UJL9 534 aa7□□□□□ -1.29
VPS50-213ENST00000477572 NUB1Q9Y5A7 615 aa7□□□□□ -1.29
VPS50-213ENST00000477572 C9orf118A6NHY6 69 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 AQP7O14520 342 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 CYP7B1O75881 506 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 PYGMP11217 842 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 COL6A1P12109 1028 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 PDE6AP16499 860 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 SERINC3Q13530 473 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 RASA3Q14644 834 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
VPS50-213ENST00000477572 KBTBD2Q8IY47 623 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 PMFBP1Q8TBY8 1022 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 WRNIP1Q96S55 665 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 DHRS4Q9BTZ2 278 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 SLC39A2Q9NP94 309 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 RIC8BQ9NVN3 520 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 SMPD4Q9NXE4 827 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 SNTG2Q9NY99 539 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 HSPBP1Q9NZL4 362 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 ARHGAP20Q9P2F6 1191 aa6.99□□□□□ -1.29
VPS50-213ENST00000477572 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.98□□□□□ -1.29
VPS50-213ENST00000477572 B4GALT4O60513 344 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 CRTAMO95727 393 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 INSRRP14616 1297 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 DNM2P50570 870 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 BTBD8Q5XKL5 378 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 MAMDC2Q7Z304 686 aaPredicted RBP6.98□□□□□ -1.29
VPS50-213ENST00000477572 IGDCC4Q8TDY8 1250 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 FBXW5Q969U6 566 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 C8orf49Q96NF6 230 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 SRPK1Q96SB4 655 aaKnown RBP6.98□□□□□ -1.29
VPS50-213ENST00000477572 DNAJC7Q99615 494 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 PTPN18Q99952 460 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 TACO1Q9BSH4 297 aaKnown RBP6.98□□□□□ -1.29
VPS50-213ENST00000477572 CBLCQ9ULV8 474 aa6.98□□□□□ -1.29
VPS50-213ENST00000477572 MRPS23Q9Y3D9 190 aaKnown RBP6.98□□□□□ -1.29
VPS50-213ENST00000477572 FAM90A27PA6NNH2 459 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 LAMTOR5O43504 91 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 AMY2AP04746 511 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 ENO2P09104 434 aaPredicted RBP6.97□□□□□ -1.29
VPS50-213ENST00000477572 AMY2BP19961 511 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 MAGEA10P43363 369 aaPredicted RBP6.97□□□□□ -1.29
VPS50-213ENST00000477572 EPHA5P54756 1037 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 JAM2P57087 298 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 NFATC3Q12968 1075 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 SMAD2Q15796 467 aaKnown RBP6.97□□□□□ -1.29
VPS50-213ENST00000477572 GLB1LQ6UWU2 654 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 GPR20Q99678 358 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 BARX1Q9HBU1 254 aaPredicted RBP6.97□□□□□ -1.29
VPS50-213ENST00000477572 JADE2Q9NQC1 790 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 PPP4R1LQ9P1A2 415 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 NDOR1Q9UHB4 597 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 ST6GALNAC2Q9UJ37 374 aa6.97□□□□□ -1.29
VPS50-213ENST00000477572 ZNF839A8K0R7 811 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 MAN2B1O00754 1011 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 KLHL18O94889 574 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 IL18BPO95998 194 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 KNG1P01042 644 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 GABREP78334 506 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 ST5P78524 1137 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 RBL2Q08999 1139 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 EP400NLQ6ZTU2 488 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 GPR155Q7Z3F1 870 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 ZC3H7AQ8IWR0 971 aaKnown RBP6.96□□□□□ -1.3
VPS50-213ENST00000477572 SRPK3Q9UPE1 567 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 JAG2Q9Y219 1238 aa6.96□□□□□ -1.3
VPS50-213ENST00000477572 ARVCFO00192 962 aa6.95□□□□□ -1.3
VPS50-213ENST00000477572 PTPN1P18031 435 aaKnown RBP6.95□□□□□ -1.3
VPS50-213ENST00000477572 PUM1Q14671 1186 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS50-213ENST00000477572 GPR19Q15760 415 aa6.95□□□□□ -1.3
VPS50-213ENST00000477572 DBX2Q6ZNG2 339 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms