RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 PPP1R42Q7Z4L9 355 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 COL23A1Q86Y22 540 aaPredicted RBP5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 SIRT2Q8IXJ6 389 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 ZNF655Q8N720 491 aaPredicted RBP5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 ATG4CQ96DT6 458 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 MAP6Q96JE9 813 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 NYXQ9GZU5 481 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 CHPF2Q9P2E5 772 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 TCFL5Q9UL49 500 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 MINPP1Q9UNW1 487 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 HDAC5Q9UQL6 1122 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 PNPLA7Q6ZV29 1317 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 ZNF521Q96K83 1311 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 KIF16BQ96L93 1317 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 C5P01031 1676 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 RREB1Q92766 1687 aa5.66□□□□□ -1.5
NSMCE4A-208ENST00000477289 SIPA1L3O60292 1781 aaPredicted RBP5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 KDM3BQ7LBC6 1761 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 PRAMEF22A3QJZ6 481 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 NRDCO43847 1150 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 VAMP4O75379 141 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 ZBTB7AO95365 584 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 PRAMEF1O95521 474 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 PIP4K2AP48426 406 aaPredicted RBP5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 CHMP4BP1P59074 171 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 ST5P78524 1137 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 MRPL58Q14197 206 aaKnown RBP5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 KRT24Q2M2I5 525 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 PARP10Q53GL7 1025 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 NBPF5PQ86XG9 351 aaPredicted RBP5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 TMEM151BQ8IW70 566 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 PLBD2Q8NHP8 589 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 HHIPL1Q96JK4 782 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 ZNF512BQ96KM6 892 aaPredicted RBP5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 API5Q9BZZ5 524 aaKnown RBP5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 PRDM14Q9GZV8 571 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 TMX4Q9H1E5 349 aaPredicted RBP5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 CHMP4BQ9H444 224 aaKnown RBP5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 ANTXR1Q9H6X2 564 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 UBP1Q9NZI7 540 aa5.65□□□□□ -1.5
NSMCE4A-208ENST00000477289 PAPPAQ13219 1627 aa5.65□□□□□ -1.51
NSMCE4A-208ENST00000477289 PTPRCP08575 1304 aa5.65□□□□□ -1.51
NSMCE4A-208ENST00000477289 MAP3K15Q6ZN16 1313 aa5.65□□□□□ -1.51
NSMCE4A-208ENST00000477289 USP42Q9H9J4 1324 aaKnown RBP5.65□□□□□ -1.51
NSMCE4A-208ENST00000477289 UBR2Q8IWV8 1755 aa5.65□□□□□ -1.51
NSMCE4A-208ENST00000477289 OTOL1A6NHN0 477 aaPredicted RBP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 RFXAPO00287 272 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 TCERG1O14776 1098 aaKnown RBP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 SASH1O94885 1247 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 CENPBP07199 599 aaPredicted RBP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 SYPP08247 313 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 CELA3BP08861 270 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 MMP10P09238 476 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 KIR2DL1P43626 348 aaPredicted RBP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 KIR2DL2P43627 348 aaPredicted RBP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 PCBP3P57721 371 aaKnown RBP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 SSPNQ14714 243 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 SEZ6Q53EL9 994 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 KSR2Q6VAB6 950 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 NLRC3Q7RTR2 1065 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 FTSJ3Q8IY81 847 aaKnown RBP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 TSPYL6Q8N831 410 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 FRAT1Q92837 279 aaPredicted RBP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 PLCD4Q9BRC7 762 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 GZF1Q9H116 711 aaPredicted RBP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 TMPRSS5Q9H3S3 457 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 GGT7Q9UJ14 662 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 ZMYM5Q9UJ78 669 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 NIP7Q9Y221 180 aaKnown RBP eCLIP5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 NUP188Q5SRE5 1749 aa5.64□□□□□ -1.51
NSMCE4A-208ENST00000477289 LAMB4A4D0S4 1761 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 TAF1LQ8IZX4 1826 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 OR14I1A6ND48 311 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 SIGLEC6O43699 453 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 FKTNO75072 461 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 ANXA1P04083 346 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 SERPINB2P05120 415 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 GYS1P13807 737 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 RAD51AP2Q09MP3 1159 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 TCIRG1Q13488 830 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 ADGRF1Q5T601 910 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 SLC4A10Q6U841 1118 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 GK5Q6ZS86 529 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 CEP128Q6ZU80 1094 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 TMEM192Q8IY95 271 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 TRMT2AQ8IZ69 625 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 REXO1Q8N1G1 1221 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 CNBD1Q8NA66 436 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 MYD88Q99836 296 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 PHAXQ9H814 394 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 CRTAC1Q9NQ79 661 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 SRP68Q9UHB9 627 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 MBD1Q9UIS9 605 aaPredicted RBP5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 MAP3K2Q9Y2U5 619 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 RNF123Q5XPI4 1314 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 CARMIL3Q8ND23 1372 aa5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 CICQ96RK0 1608 aaPredicted RBP5.63□□□□□ -1.51
NSMCE4A-208ENST00000477289 TJP1Q07157 1748 aa5.62□□□□□ -1.51
NSMCE4A-208ENST00000477289 PI4KAP2A4QPH2 592 aa5.62□□□□□ -1.51
NSMCE4A-208ENST00000477289 MEIS3P2A8K0S8 358 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms