RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 STK4Q13043 487 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 SYT2Q8N9I0 419 aaPredicted RBP16.15■□□□□ 0.18
COL4A6-206ENST00000477085 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 ENOX1Q8TC92 643 aaKnown RBP16.15■□□□□ 0.18
COL4A6-206ENST00000477085 PIGOQ8TEQ8 1089 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 MMP19Q99542 508 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 TBC1D22BQ9NU19 505 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 FANCLQ9NW38 375 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 MORF4L1Q9UBU8 362 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 DNM3Q9UQ16 869 aa16.15■□□□□ 0.18
COL4A6-206ENST00000477085 SMTNL1A8MU46 457 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 IGF2BP3O00425 579 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL4A6-206ENST00000477085 MAFGO15525 162 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 EIF3JO75822 258 aaKnown RBP16.14■□□□□ 0.17
COL4A6-206ENST00000477085 ERCC5P28715 1186 aaPredicted RBP16.14■□□□□ 0.17
COL4A6-206ENST00000477085 COPB2P35606 906 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 PDE4DQ08499 809 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 STXBP2Q15833 593 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 KLHL10Q6JEL2 608 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 RGMBQ6NW40 437 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 UNC13DQ70J99 1090 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 NLRX1Q86UT6 975 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 BANK1Q8NDB2 785 aa16.14■□□□□ 0.17
COL4A6-206ENST00000477085 GTF3C2Q8WUA4 911 aaPredicted RBP16.14■□□□□ 0.17
COL4A6-206ENST00000477085 ANP32BQ92688 251 aaKnown RBP16.14■□□□□ 0.17
COL4A6-206ENST00000477085 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
COL4A6-206ENST00000477085 PVALEFA0A1B0GWK0 134 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 STAM2O75886 525 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 ATP1A3P13637 1013 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 STX17P56962 302 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 SARM1Q6SZW1 724 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 MIER3Q7Z3K6 550 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 GPBP1Q86WP2 473 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 ADSSL1Q8N142 457 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 KIAA0895Q8NCT3 520 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 BHMT2Q9H2M3 363 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 DACH1Q9UI36 760 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 FAM155AB1AL88 458 aaPredicted RBP16.13■□□□□ 0.17
COL4A6-206ENST00000477085 EYA4O95677 639 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 ICAM3P32942 547 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 GCLCP48506 637 aaPredicted RBP16.13■□□□□ 0.17
COL4A6-206ENST00000477085 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
COL4A6-206ENST00000477085 CT47A1Q5JQC4 288 aaPredicted RBP16.13■□□□□ 0.17
COL4A6-206ENST00000477085 WDR78Q5VTH9 848 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 GLIS3Q8NEA6 775 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 LXNQ9BS40 222 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 TLL2Q9Y6L7 1015 aa16.13■□□□□ 0.17
COL4A6-206ENST00000477085 ZNF75DP51815 510 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 PMS1P54277 932 aaKnown RBP16.12■□□□□ 0.17
COL4A6-206ENST00000477085 RAD51AP2Q09MP3 1159 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 GIT2Q14161 759 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 KCTD2Q14681 263 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 UGCGQ16739 394 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 SEPT14Q6ZU15 432 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 RUSC1Q9BVN2 902 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 SAMSN1Q9NSI8 373 aaKnown RBP16.12■□□□□ 0.17
COL4A6-206ENST00000477085 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 CTNND2Q9UQB3 1225 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 NFE2L3Q9Y4A8 694 aa16.12■□□□□ 0.17
COL4A6-206ENST00000477085 SORBS3O60504 671 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 P4HBP07237 508 aaKnown RBP16.11■□□□□ 0.17
COL4A6-206ENST00000477085 SLC10A3P09131 477 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 IDEP14735 1019 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 ZNF18P17022 549 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 MUTP22033 750 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 HSP90AA4PQ58FG1 418 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 KCTD17Q8N5Z5 321 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 PARK7Q99497 189 aaKnown RBP16.11■□□□□ 0.17
COL4A6-206ENST00000477085 SENP7Q9BQF6 1050 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 FGFBP2Q9BYJ0 223 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 LRRC27Q9C0I9 530 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 POLD4Q9HCU8 107 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 SLC39A2Q9NP94 309 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 ADD3Q9UEY8 706 aaKnown RBP16.11■□□□□ 0.17
COL4A6-206ENST00000477085 PCDHA2Q9Y5H9 948 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 NFASCO94856 1347 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 ADGRA2Q96PE1 1338 aa16.11■□□□□ 0.17
COL4A6-206ENST00000477085 FRMD3A2A2Y4 597 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 KRT76Q01546 638 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 RINT1Q6NUQ1 792 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 NELFBQ8WX92 580 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 ZIC5Q96T25 663 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 TRIM5Q9C035 493 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 RWDD2AQ9UIY3 292 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 SAMM50Q9Y512 469 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 MANSC4A6NHS7 340 aaPredicted RBP16.1■□□□□ 0.17
COL4A6-206ENST00000477085 COASYQ13057 564 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 ZNF792Q3KQV3 632 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 GNPTABQ3T906 1256 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 SPATA1Q5VX52 437 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 ZNF746Q6NUN9 644 aaPredicted RBP16.1■□□□□ 0.17
COL4A6-206ENST00000477085 C1orf186Q6ZWK4 172 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 NEK9Q8TD19 979 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 MORC4Q8TE76 937 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 CDHR1Q96JP9 859 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 NACC1Q96RE7 527 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 REEP2Q9BRK0 252 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 PANK4Q9NVE7 773 aa16.1■□□□□ 0.17
COL4A6-206ENST00000477085 CPA4Q9UI42 421 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms