RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 HAUS4Q9H6D7 363 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 EYA4O95677 639 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 HSD17B4P51659 736 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 AMPD2Q01433 879 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 GHRHRQ02643 423 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 RAD51AP2Q09MP3 1159 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 TUBB2AQ13885 445 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 BMT2Q1RMZ1 405 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 LDHDQ86WU2 507 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 TRIM59Q8IWR1 403 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 ARID3AQ99856 593 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 TUBB2BQ9BVA1 445 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 TUFT1Q9NNX1 390 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 CDC23Q9UJX2 597 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 RPTORQ8N122 1335 aa12.73□□□□□ -0.37
NUP188-205ENST00000477069 NFKBIEO00221 500 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 TRAF5O00463 557 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 LCA5LO95447 670 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 GNA14O95837 355 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 EGFRP00533 1210 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 ZNF76P36508 570 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 SF3B2Q13435 895 aaKnown RBP12.72□□□□□ -0.37
NUP188-205ENST00000477069 TSR1Q2NL82 804 aaKnown RBP12.72□□□□□ -0.37
NUP188-205ENST00000477069 NELFCDQ8IXH7 590 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 RUSC1Q9BVN2 902 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 TAOK3Q9H2K8 898 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 TRAF3IP3Q9Y228 551 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 CTAGE9A4FU28 777 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 RCCD1A6NED2 376 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 ZNF263O14978 683 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 SLITRK3O94933 977 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 KIF20AO95235 890 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 INPP5BP32019 993 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 CYLC1P35663 651 aaPredicted RBP12.72□□□□□ -0.37
NUP188-205ENST00000477069 KRT83P78385 493 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 CYP4A11Q02928 519 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 RASA3Q14644 834 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 SFR1Q86XK3 245 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 PCMTD1Q96MG8 357 aaPredicted RBP12.72□□□□□ -0.37
NUP188-205ENST00000477069 PURBQ96QR8 312 aaKnown RBP12.72□□□□□ -0.37
NUP188-205ENST00000477069 NAPGQ99747 312 aaPredicted RBP12.72□□□□□ -0.37
NUP188-205ENST00000477069 EDEM3Q9BZQ6 932 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 ARHGAP20Q9P2F6 1191 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 ICAM1P05362 532 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 CLCN6P51797 869 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 SLC30A10Q6XR72 485 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 CCDC155Q8N6L0 562 aa12.72□□□□□ -0.37
NUP188-205ENST00000477069 FAM207AQ9NSI2 230 aaPredicted RBP12.72□□□□□ -0.37
NUP188-205ENST00000477069 ZNHIT6Q9NWK9 470 aaKnown RBP12.72□□□□□ -0.37
NUP188-205ENST00000477069 RLFQ13129 1914 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 NOL4O94818 638 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 KRT18P05783 430 aaKnown RBP12.71□□□□□ -0.37
NUP188-205ENST00000477069 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.37
NUP188-205ENST00000477069 CEP55Q53EZ4 464 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
NUP188-205ENST00000477069 LRCH2Q5VUJ6 765 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 SRGAP1Q7Z6B7 1085 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 CLEC4DQ8WXI8 215 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 ZNF341Q9BYN7 854 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 TFR2Q9UP52 801 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 RABGAP1Q9Y3P9 1069 aa12.71□□□□□ -0.37
NUP188-205ENST00000477069 RSPH10B2B2RC85 870 aa12.71□□□□□ -0.38
NUP188-205ENST00000477069 RSPH10BP0C881 870 aa12.71□□□□□ -0.38
NUP188-205ENST00000477069 MUTP22033 750 aa12.71□□□□□ -0.38
NUP188-205ENST00000477069 PRELPP51888 382 aa12.71□□□□□ -0.38
NUP188-205ENST00000477069 SETQ01105 290 aaPredicted RBP12.71□□□□□ -0.38
NUP188-205ENST00000477069 EHMT1Q9H9B1 1298 aa12.71□□□□□ -0.38
NUP188-205ENST00000477069 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.38
NUP188-205ENST00000477069 LRRC53A6NM62 1247 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 WDR46O15213 610 aaKnown RBP12.7□□□□□ -0.38
NUP188-205ENST00000477069 MYBP10242 640 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 ZSCAN20P17040 1043 aaPredicted RBP12.7□□□□□ -0.38
NUP188-205ENST00000477069 POLD1P28340 1107 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 UBXN2AP68543 259 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 CCDC40Q4G0X9 1142 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 RINT1Q6NUQ1 792 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 PDXDC1Q6P996 788 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 DYDC2Q96IM9 177 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 LACRTQ9GZZ8 138 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 KIAA1683Q9H0B3 1180 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 BCAS3Q9H6U6 928 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 OGFRQ9NZT2 677 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 COL20A1Q9P218 1284 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 FRMPD4Q14CM0 1322 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 COL11A1P12107 1806 aaPredicted RBP12.7□□□□□ -0.38
NUP188-205ENST00000477069 ARP10275 920 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 ERCC3P19447 782 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 RPS12P25398 132 aaKnown RBP12.7□□□□□ -0.38
NUP188-205ENST00000477069 CTTNQ14247 550 aaKnown RBP12.7□□□□□ -0.38
NUP188-205ENST00000477069 TNIP1Q15025 636 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 KNOP1Q1ED39 458 aaKnown RBP12.7□□□□□ -0.38
NUP188-205ENST00000477069 ASTE1Q2TB18 679 aaPredicted RBP12.7□□□□□ -0.38
NUP188-205ENST00000477069 C1orf186Q6ZWK4 172 aa12.7□□□□□ -0.38
NUP188-205ENST00000477069 GPR161Q8N6U8 529 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms