RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 FAM20AQ96MK3 541 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 PSMD1Q99460 953 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 REEP2Q9BRK0 252 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 CRACR2AQ9BSW2 395 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 WDR18Q9BV38 432 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 IGLV3-22A0A075B6J6 115 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 LRRC53A6NM62 1247 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 RSPH10B2B2RC85 870 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 RSPH10BP0C881 870 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 CCDC40Q4G0X9 1142 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 PIGOQ8TEQ8 1089 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 CCDC42Q96M95 316 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 BHMT2Q9H2M3 363 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 ANKZF1Q9H8Y5 726 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 GOPCQ9HD26 462 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 MYO1AQ9UBC5 1043 aa18.41■□□□□ 0.54
TVP23B-202ENST00000476139 PIK3CDO00329 1044 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 POLD1P28340 1107 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 CYLC1P35663 651 aaPredicted RBP18.4■□□□□ 0.54
TVP23B-202ENST00000476139 KRT83P78385 493 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 SYT2Q8N9I0 419 aaPredicted RBP18.4■□□□□ 0.54
TVP23B-202ENST00000476139 SFI1A8K8P3 1242 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 CHMP2AO43633 222 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 SRGAP2O75044 1071 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 CTTNQ14247 550 aaKnown RBP18.4■□□□□ 0.54
TVP23B-202ENST00000476139 LONRF2Q1L5Z9 754 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 CCDC170Q8IYT3 715 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 ERMNQ8TAM6 284 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 JAKMIP2Q96AA8 810 aa18.4■□□□□ 0.54
TVP23B-202ENST00000476139 EIF2AK1Q9BQI3 630 aaKnown RBP18.4■□□□□ 0.54
TVP23B-202ENST00000476139 MACROD2A1Z1Q3 448 aa18.39■□□□□ 0.54
TVP23B-202ENST00000476139 FRMD3A2A2Y4 597 aa18.39■□□□□ 0.54
TVP23B-202ENST00000476139 EIF3CLB5ME19 914 aaKnown RBP18.39■□□□□ 0.54
TVP23B-202ENST00000476139 OAS2P29728 719 aaKnown RBP18.39■□□□□ 0.54
TVP23B-202ENST00000476139 AMPD2Q01433 879 aa18.39■□□□□ 0.54
TVP23B-202ENST00000476139 ADAM9Q13443 819 aa18.39■□□□□ 0.54
TVP23B-202ENST00000476139 SMC1AQ14683 1233 aaKnown RBP18.39■□□□□ 0.54
TVP23B-202ENST00000476139 EIF3CQ99613 913 aaKnown RBP18.39■□□□□ 0.54
TVP23B-202ENST00000476139 NLRC4Q9NPP4 1024 aa18.39■□□□□ 0.54
TVP23B-202ENST00000476139 ATP1A1P05023 1023 aaKnown RBP18.39■□□□□ 0.53
TVP23B-202ENST00000476139 CXCL9Q07325 125 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 MCTP2Q6DN12 878 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 SFR1Q86XK3 245 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 NOA1Q8NC60 698 aaKnown RBP18.39■□□□□ 0.53
TVP23B-202ENST00000476139 FUT8Q9BYC5 575 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 MYO6Q9UM54 1294 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 WNT10BO00744 389 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 CYP3A4P08684 503 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 HOXD13P35453 343 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 CAP2P40123 477 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 BAP1Q92560 729 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 RUSC1Q9BVN2 902 aa18.39■□□□□ 0.53
TVP23B-202ENST00000476139 ABCB11O95342 1321 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 COL2A1P02458 1487 aaPredicted RBP18.38■□□□□ 0.53
TVP23B-202ENST00000476139 OTOP1Q7RTM1 612 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 VCPKMTQ9H867 229 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 ZNRF3Q9ULT6 936 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 GCOM1H8Y6P7 765 aaPredicted RBP18.38■□□□□ 0.53
TVP23B-202ENST00000476139 KRT86O43790 486 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 IPO7O95373 1038 aaKnown RBP18.38■□□□□ 0.53
TVP23B-202ENST00000476139 POLR2MP0CAP2 368 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 MYBP10242 640 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 HNRNPH3P31942 346 aaKnown RBP18.38■□□□□ 0.53
TVP23B-202ENST00000476139 EIF4A3P38919 411 aaKnown RBP18.38■□□□□ 0.53
TVP23B-202ENST00000476139 KCNA1Q09470 495 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 DGKZQ13574 1117 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 CEP112Q8N8E3 955 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 HINFPQ9BQA5 517 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 PITPNM2Q9BZ72 1349 aa18.38■□□□□ 0.53
TVP23B-202ENST00000476139 NOL4O94818 638 aa18.37■□□□□ 0.53
TVP23B-202ENST00000476139 PRPF6O94906 941 aaKnown RBP18.37■□□□□ 0.53
TVP23B-202ENST00000476139 EGFRP00533 1210 aa18.37■□□□□ 0.53
TVP23B-202ENST00000476139 CDK17Q00537 523 aa18.37■□□□□ 0.53
TVP23B-202ENST00000476139 TPH2Q8IWU9 490 aa18.37■□□□□ 0.53
TVP23B-202ENST00000476139 CAPZA3Q96KX2 299 aa18.37■□□□□ 0.53
TVP23B-202ENST00000476139 RANBP17Q9H2T7 1088 aaKnown RBP18.37■□□□□ 0.53
TVP23B-202ENST00000476139 SLITRK3O94933 977 aa18.37■□□□□ 0.53
TVP23B-202ENST00000476139 CACNA2D4Q7Z3S7 1137 aa18.37■□□□□ 0.53
TVP23B-202ENST00000476139 IKZF4Q9H2S9 585 aa18.37■□□□□ 0.53
TVP23B-202ENST00000476139 SYNPO2Q9UMS6 1093 aa18.37■□□□□ 0.53
TVP23B-202ENST00000476139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.37■□□□□ 0.53
TVP23B-202ENST00000476139 NR2F2P24468 414 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 TRIM59Q8IWR1 403 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 NIM1KQ8IY84 436 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 NEK11Q8NG66 645 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 CHURC1Q8WUH1 139 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 AGBL1Q96MI9 1066 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 HSD17B14Q9BPX1 270 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 KIF11P52732 1056 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 FOXR2Q6PJQ5 311 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 LDHDQ86WU2 507 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 CEP63Q96MT8 703 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 ABCB6Q9NP58 842 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 PGAP2Q9UHJ9 254 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 RABGAP1Q9Y3P9 1069 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 CTAGE15A4D2H0 777 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 CTAGE8P0CG41 777 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 ARP10275 920 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 INPP5BP32019 993 aa18.36■□□□□ 0.53
TVP23B-202ENST00000476139 SPA17Q15506 151 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms