RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 TCP10L2B9ZVM9 353 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 ENTPD3O75355 529 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 USP2O75604 605 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-206ENST00000476045 TBC1D8O95759 1140 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 RLBP1P12271 317 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 CAPN2P17655 700 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 USP11P51784 963 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 GSTO1P78417 241 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 PLCB3Q01970 1234 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 SP3Q02447 781 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 CRHR2Q13324 411 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 PRKG1Q13976 671 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 COL19A1Q14993 1142 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS13D-206ENST00000476045 APOBEC3HQ6NTF7 200 aaKnown RBP5.11□□□□□ -1.59
VPS13D-206ENST00000476045 ATF7IPQ6VMQ6 1270 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 DTHD1Q6ZMT9 781 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 OTOP1Q7RTM1 612 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 ATG9AQ7Z3C6 839 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 ZSCAN29Q8IWY8 852 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-206ENST00000476045 SHISA5Q8N114 240 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 GIMAP7Q8NHV1 300 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 FAM151AQ8WW52 585 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 BRI3BPQ8WY22 251 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 IDI2Q9BXS1 227 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 PPP1R9AQ9ULJ8 1098 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 SCAF8Q9UPN6 1271 aaKnown RBP5.11□□□□□ -1.59
VPS13D-206ENST00000476045 SLC45A1Q9Y2W3 748 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 DAGLAQ9Y4D2 1042 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 TRIM17Q9Y577 477 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 LRRFIP2Q9Y608 721 aaKnown RBP5.11□□□□□ -1.59
VPS13D-206ENST00000476045 SNCAIPQ9Y6H5 919 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 MROH7-TTC4A0A0A0MT08 1334 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 AOX1Q06278 1338 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 DOCK3Q8IZD9 2030 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 SRGAP3O43295 1099 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 TLR2O60603 784 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 GNAI2P04899 355 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 UQCRFS1P1P0C7P4 283 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 NME2P22392 152 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 PRDX5P30044 214 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 GP2P55259 537 aaKnown RBP5.1□□□□□ -1.59
VPS13D-206ENST00000476045 FCGRTP55899 365 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 SOX10P56693 466 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 PPP2R3AQ06190 1150 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 RASGRF1Q13972 1273 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 NFKBIBQ15653 356 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 SLC9C1Q4G0N8 1177 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 FRMPD3Q5JV73 1810 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 MCTP1Q6DN14 999 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 ALG1LQ6GMV1 187 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 NXPE4Q6UWF7 544 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 ANKRD23Q86SG2 305 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 FTSJ3Q8IY81 847 aaKnown RBP5.1□□□□□ -1.59
VPS13D-206ENST00000476045 KLHDC4Q8TBB5 520 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 STK35Q8TDR2 534 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 WDR89Q96FK6 387 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-206ENST00000476045 NECAB3Q96P71 396 aaPredicted RBP5.1□□□□□ -1.59
VPS13D-206ENST00000476045 MEIS3Q99687 375 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 KRTAP4-12Q9BQ66 201 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 NOL10Q9BSC4 688 aaKnown RBP5.1□□□□□ -1.59
VPS13D-206ENST00000476045 SIL1Q9H173 461 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 GPR108Q9NPR9 543 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 ZNF236Q9UL36 1845 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 NOB1Q9ULX3 412 aaKnown RBP5.1□□□□□ -1.59
VPS13D-206ENST00000476045 AP4E1Q9UPM8 1137 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 PCDHAC2Q9Y5I4 1007 aa5.1□□□□□ -1.59
VPS13D-206ENST00000476045 OAS3Q9Y6K5 1087 aaKnown RBP5.1□□□□□ -1.59
VPS13D-206ENST00000476045 A0A0G2JMZ2 1700 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 ADGRA2Q96PE1 1338 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 A0A1B0GUL7 405 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 CXCL11O14625 94 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 ENC1O14682 589 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 LDHCP07864 332 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 NFICP08651 508 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 TRIM27P14373 513 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 HOXD10P28358 340 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 GSTT1P30711 240 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 PHKA1P46020 1223 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 ID3Q02535 119 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 GORABQ5T7V8 394 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 ZKSCAN2Q63HK3 967 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 CDC42EP5Q6NZY7 148 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 FASTKD5Q7L8L6 764 aaKnown RBP5.09□□□□□ -1.59
VPS13D-206ENST00000476045 SULF2Q8IWU5 870 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 SCYL3Q8IZE3 742 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 CD99L2Q8TCZ2 262 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 ZNF333Q96JL9 665 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 FANCD2OSQ96PS1 177 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 OSBPL1AQ9BXW6 950 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 OSBPL7Q9BZF2 842 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 ATXN3LQ9H3M9 355 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 PICK1Q9NRD5 415 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 DISC1Q9NRI5 854 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 GINM1Q9NU53 330 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 HERC5Q9UII4 1024 aaKnown RBP5.09□□□□□ -1.59
VPS13D-206ENST00000476045 ZNF112Q9UJU3 913 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 PTPN22Q9Y2R2 807 aa5.09□□□□□ -1.59
VPS13D-206ENST00000476045 A0A0G2JLL6 359 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-206ENST00000476045 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms