RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 FZD1Q9UP38 647 aa23.4■■□□□ 1.34
SH3D21-202ENST00000474766 NPM3O75607 178 aaKnown RBP23.39■■□□□ 1.34
SH3D21-202ENST00000474766 HERVK_113P62684 666 aa23.39■■□□□ 1.34
SH3D21-202ENST00000474766 MEA1Q16626 185 aa23.39■■□□□ 1.34
SH3D21-202ENST00000474766 TTI2Q6NXR4 508 aa23.39■■□□□ 1.34
SH3D21-202ENST00000474766 MOB2Q70IA6 237 aa23.39■■□□□ 1.34
SH3D21-202ENST00000474766 MMTAG2Q9BU76 263 aaKnown RBP23.39■■□□□ 1.34
SH3D21-202ENST00000474766 TRIM10Q9UDY6 481 aa23.39■■□□□ 1.34
SH3D21-202ENST00000474766 LUC7L2Q9Y383 392 aaKnown RBP23.39■■□□□ 1.34
SH3D21-202ENST00000474766 ENC1O14682 589 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 B4GALNT4Q76KP1 1039 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 SH3BP5LQ7L8J4 393 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 CNPY4Q8N129 248 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 ZNF507Q8TCN5 953 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 NOC3LQ8WTT2 800 aaKnown RBP23.38■■□□□ 1.33
SH3D21-202ENST00000474766 KAT2BQ92831 832 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 MTMR9Q96QG7 549 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 BIN2Q9UBW5 565 aaPredicted RBP23.38■■□□□ 1.33
SH3D21-202ENST00000474766 ABT1Q9ULW3 272 aaKnown RBP23.38■■□□□ 1.33
SH3D21-202ENST00000474766 GRIN2DO15399 1336 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 LGALS16A8MUM7 142 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 ENTPD3O75355 529 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 HNRNPH1P31943 449 aaKnown RBP23.38■■□□□ 1.33
SH3D21-202ENST00000474766 UBXN1Q04323 297 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 SAPCD2Q86UD0 394 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 BCAS4Q8TDM0 211 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 FAM151AQ8WW52 585 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 PURBQ96QR8 312 aaKnown RBP23.38■■□□□ 1.33
SH3D21-202ENST00000474766 TLL2Q9Y6L7 1015 aa23.38■■□□□ 1.33
SH3D21-202ENST00000474766 LOC102724159A0A0B4J2E5 919 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 TTC26A0AVF1 554 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 AKR1B1P15121 316 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 INPP5BP32019 993 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 CYLC1P35663 651 aaPredicted RBP23.37■■□□□ 1.33
SH3D21-202ENST00000474766 PWP2Q15269 919 aaKnown RBP23.37■■□□□ 1.33
SH3D21-202ENST00000474766 ALS2CLQ60I27 953 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 CCDC170Q8IYT3 715 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 MB21D1Q8N884 522 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 CLSTN1O94985 981 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 TECP42680 631 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 LIG3P49916 1009 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 PRKG1Q13976 671 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 CAGE1Q8TC20 777 aa23.37■■□□□ 1.33
SH3D21-202ENST00000474766 DUSP9Q99956 384 aaKnown RBP23.37■■□□□ 1.33
SH3D21-202ENST00000474766 A1CFQ9NQ94 594 aaKnown RBP23.37■■□□□ 1.33
SH3D21-202ENST00000474766 FRMPD2Q68DX3 1309 aaPredicted RBP23.36■■□□□ 1.33
SH3D21-202ENST00000474766 DDTLA6NHG4 134 aaPredicted RBP23.36■■□□□ 1.33
SH3D21-202ENST00000474766 MYBL2P10244 700 aa23.36■■□□□ 1.33
SH3D21-202ENST00000474766 NF2P35240 595 aa23.36■■□□□ 1.33
SH3D21-202ENST00000474766 COBLL1Q53SF7 1204 aa23.36■■□□□ 1.33
SH3D21-202ENST00000474766 KIAA1328Q86T90 577 aa23.36■■□□□ 1.33
SH3D21-202ENST00000474766 C2orf69Q8N8R5 385 aa23.36■■□□□ 1.33
SH3D21-202ENST00000474766 TACO1Q9BSH4 297 aaKnown RBP23.36■■□□□ 1.33
SH3D21-202ENST00000474766 TMEM260Q9NX78 707 aa23.36■■□□□ 1.33
SH3D21-202ENST00000474766 SWAP70Q9UH65 585 aa23.36■■□□□ 1.33
SH3D21-202ENST00000474766 OTOFQ9HC10 1997 aa23.36■■□□□ 1.33
SH3D21-202ENST00000474766 EDIL3O43854 480 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 PPP1R2P41236 205 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 AMPD3Q01432 767 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 PRPF38AQ8NAV1 312 aaKnown RBP23.35■■□□□ 1.33
SH3D21-202ENST00000474766 CCDC47Q96A33 483 aaKnown RBP23.35■■□□□ 1.33
SH3D21-202ENST00000474766 TRIM47Q96LD4 638 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 TSGA10Q9BZW7 698 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 SRGAP2O75044 1071 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 TTLL1O95922 423 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 PRLRP16471 622 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 CCNE1P24864 410 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 FXR2P51116 673 aaKnown RBP eCLIP23.35■■□□□ 1.33
SH3D21-202ENST00000474766 ADCY7P51828 1080 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 GNGT1P63211 74 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 SUPT20HL1Q3ZLR7 823 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 LRRC47Q8N1G4 583 aaKnown RBP23.35■■□□□ 1.33
SH3D21-202ENST00000474766 RETREG2Q8NC44 543 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 SERPINB13Q9UIV8 391 aa23.35■■□□□ 1.33
SH3D21-202ENST00000474766 ZEB2O60315 1214 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 IPO7O95373 1038 aaKnown RBP23.34■■□□□ 1.33
SH3D21-202ENST00000474766 PDE4DQ08499 809 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 PPP1R18Q6NYC8 613 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 EMBQ6PCB8 327 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 WDR59Q6PJI9 974 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 P2RX5Q93086 422 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 CAPZA3Q96KX2 299 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 PAGR1Q9BTK6 254 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 NUP58Q9BVL2 599 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 EXOC1Q9NV70 894 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 PCNTO95613 3336 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 ATRNL1Q5VV63 1379 aa23.34■■□□□ 1.33
SH3D21-202ENST00000474766 BICDL2A1A5D9 508 aa23.33■■□□□ 1.33
SH3D21-202ENST00000474766 RASSF10A6NK89 507 aa23.33■■□□□ 1.33
SH3D21-202ENST00000474766 TNFRSF8P28908 595 aa23.33■■□□□ 1.33
SH3D21-202ENST00000474766 HUNKP57058 714 aa23.33■■□□□ 1.33
SH3D21-202ENST00000474766 ZNF543Q08ER8 600 aa23.33■■□□□ 1.33
SH3D21-202ENST00000474766 STK4Q13043 487 aa23.33■■□□□ 1.33
SH3D21-202ENST00000474766 DNAJC5GQ8N7S2 189 aa23.33■■□□□ 1.33
SH3D21-202ENST00000474766 COA7Q96BR5 231 aa23.33■■□□□ 1.33
SH3D21-202ENST00000474766 CALML4Q96GE6 196 aa23.33■■□□□ 1.33
SH3D21-202ENST00000474766 PDE2AO00408 941 aaPredicted RBP23.33■■□□□ 1.32
SH3D21-202ENST00000474766 SHMT1P34896 483 aa23.33■■□□□ 1.32
SH3D21-202ENST00000474766 DNM2P50570 870 aa23.33■■□□□ 1.32
SH3D21-202ENST00000474766 FKBP1BP68106 108 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms