RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 AMHP03971 560 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 ZNF76P36508 570 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 ADCY7P51828 1080 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 RCAN1P53805 252 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 C8orf34Q49A92 452 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 PPP1R18Q6NYC8 613 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 ATXN2LQ8WWM7 1075 aaKnown RBP17.28■□□□□ 0.36
VARS-223ENST00000474643 SEPT8Q92599 483 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 RNPEPQ9H4A4 650 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 BCAS3Q9H6U6 928 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
VARS-223ENST00000474643 CAND2O75155 1236 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 MARK3P27448 753 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 DEFB103AP81534 67 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 TAP1Q03518 808 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 SEMA3FQ13275 785 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 TMCO2Q7Z6W1 182 aaPredicted RBP17.27■□□□□ 0.36
VARS-223ENST00000474643 RSPH3Q86UC2 560 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 WNT8BQ93098 351 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 RAD9AQ99638 391 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 SDF4Q9BRK5 362 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 GLT8D2Q9H1C3 349 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 AZI2Q9H6S1 392 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.36
VARS-223ENST00000474643 PRDM6Q9NQX0 595 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 MTUS1Q9ULD2 1270 aa17.27■□□□□ 0.36
VARS-223ENST00000474643 CNTNAP5Q8WYK1 1306 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 hCG_1984214I3L0E3 225 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 RFXAPO00287 272 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 CDC27P30260 824 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 MRPS5P82675 430 aaKnown RBP17.26■□□□□ 0.35
VARS-223ENST00000474643 AKAP17AQ02040 695 aaKnown RBP17.26■□□□□ 0.35
VARS-223ENST00000474643 PPFIA1Q13136 1202 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 TRIM71Q2Q1W2 868 aaKnown RBP17.26■□□□□ 0.35
VARS-223ENST00000474643 WWC2Q6AWC2 1192 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 FBXL16Q8N461 479 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 ZNF713Q8N859 430 aaPredicted RBP17.26■□□□□ 0.35
VARS-223ENST00000474643 SEPT1Q8WYJ6 367 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
VARS-223ENST00000474643 LARP6Q9BRS8 491 aaKnown RBP17.26■□□□□ 0.35
VARS-223ENST00000474643 ERAP1Q9NZ08 941 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 TCEAL9Q9UHQ7 104 aa17.26■□□□□ 0.35
VARS-223ENST00000474643 V9GY48 417 aaPredicted RBP17.26■□□□□ 0.35
VARS-223ENST00000474643 NRCAMQ92823 1304 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 MAFGO15525 162 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 GJB5O95377 273 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 FOSP01100 380 aaPredicted RBP17.25■□□□□ 0.35
VARS-223ENST00000474643 ADD1P35611 737 aaKnown RBP17.25■□□□□ 0.35
VARS-223ENST00000474643 CCT2P78371 535 aaKnown RBP17.25■□□□□ 0.35
VARS-223ENST00000474643 TOB2Q14106 344 aaPredicted RBP17.25■□□□□ 0.35
VARS-223ENST00000474643 HIC1Q14526 733 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 AAK1Q2M2I8 961 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 DBF4BQ8NFT6 615 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 LMBR1Q8WVP7 490 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 AGXT2Q9BYV1 514 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 SMARCAD1Q9H4L7 1026 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 JPH1Q9HDC5 661 aaPredicted RBP17.25■□□□□ 0.35
VARS-223ENST00000474643 RIC8AQ9NPQ8 531 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 TRPC6Q9Y210 931 aa17.25■□□□□ 0.35
VARS-223ENST00000474643 SMCO2A6NFE2 343 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 CPLX1O14810 134 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 KCNA2P16389 499 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 ITGB5P18084 799 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 PDIA3P30101 505 aaKnown RBP17.24■□□□□ 0.35
VARS-223ENST00000474643 IGBP1P78318 339 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 STK3Q13188 491 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 ANKRD1Q15327 319 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 TAF2Q6P1X5 1199 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 CCDC12Q8WUD4 166 aaPredicted RBP17.24■□□□□ 0.35
VARS-223ENST00000474643 PGBD1Q96JS3 809 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 YME1L1Q96TA2 773 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 JADE2Q9NQC1 790 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 INSL6Q9Y581 213 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 UBIAD1Q9Y5Z9 338 aa17.24■□□□□ 0.35
VARS-223ENST00000474643 TET1Q8NFU7 2136 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 DOCK5Q9H7D0 1870 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 LCHNA4D1U4 455 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 ATP9AO75110 1047 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 UPP2O95045 317 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 NEK4P51957 841 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 MBTPS1Q14703 1052 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 GPNMBQ14956 572 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 CPLX2Q6PUV4 134 aaKnown RBP17.23■□□□□ 0.35
VARS-223ENST00000474643 TEX2Q8IWB9 1127 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 APBB2Q92870 758 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 ASB2Q96Q27 587 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 TGS1Q96RS0 853 aaKnown RBP17.23■□□□□ 0.35
VARS-223ENST00000474643 ANO3Q9BYT9 981 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 IFIH1Q9BYX4 1025 aaKnown RBP17.23■□□□□ 0.35
VARS-223ENST00000474643 BARHL2Q9NY43 387 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 SLC9A2Q9UBY0 812 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 TUBE1Q9UJT0 475 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 CHD7Q9P2D1 2997 aa17.23■□□□□ 0.35
VARS-223ENST00000474643 M0QZ92 97 aa17.22■□□□□ 0.35
VARS-223ENST00000474643 AP3B2Q13367 1082 aa17.22■□□□□ 0.35
VARS-223ENST00000474643 GRIK4Q16099 956 aa17.22■□□□□ 0.35
VARS-223ENST00000474643 PLEKHG4Q58EX7 1191 aa17.22■□□□□ 0.35
VARS-223ENST00000474643 GDPD5Q8WTR4 605 aa17.22■□□□□ 0.35
VARS-223ENST00000474643 ZNF274Q96GC6 653 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms