RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PRKG1Q13976 671 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 CFAP100Q494V2 611 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 MFSD14BQ5SR56 506 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 RGMBQ6NW40 437 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 FRAT1Q92837 279 aaPredicted RBP8.64□□□□□ -1.03
VPS50-211ENST00000474412 TMEM74Q96NL1 305 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 RSRP1Q9BUV0 290 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 API5Q9BZZ5 524 aaKnown RBP8.64□□□□□ -1.03
VPS50-211ENST00000474412 FBRSQ9HAH7 460 aa8.64□□□□□ -1.03
VPS50-211ENST00000474412 RBBP6Q7Z6E9 1792 aaKnown RBP8.63□□□□□ -1.03
VPS50-211ENST00000474412 ADAMTS4O75173 837 aa8.63□□□□□ -1.03
VPS50-211ENST00000474412 BPNT1O95861 308 aa8.63□□□□□ -1.03
VPS50-211ENST00000474412 PF4P02776 101 aa8.63□□□□□ -1.03
VPS50-211ENST00000474412 ZNF16P17020 682 aaPredicted RBP8.63□□□□□ -1.03
VPS50-211ENST00000474412 ADORA1P30542 326 aa8.63□□□□□ -1.03
VPS50-211ENST00000474412 HIBADHP31937 336 aaKnown RBP8.63□□□□□ -1.03
VPS50-211ENST00000474412 CTCFP49711 727 aaPredicted RBP8.63□□□□□ -1.03
VPS50-211ENST00000474412 CAMK2GQ13555 558 aaPredicted RBP8.63□□□□□ -1.03
VPS50-211ENST00000474412 MRPL58Q14197 206 aaKnown RBP8.63□□□□□ -1.03
VPS50-211ENST00000474412 INTS3Q68E01 1043 aaKnown RBP8.63□□□□□ -1.03
VPS50-211ENST00000474412 HID1Q8IV36 788 aa8.63□□□□□ -1.03
VPS50-211ENST00000474412 TMEM57Q8N5G2 664 aa8.63□□□□□ -1.03
VPS50-211ENST00000474412 HHIPL1Q96JK4 782 aa8.63□□□□□ -1.03
VPS50-211ENST00000474412 PRMT6Q96LA8 375 aaPredicted RBP8.63□□□□□ -1.03
VPS50-211ENST00000474412 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
VPS50-211ENST00000474412 PNMA6EA0A0J9YXQ4 647 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 UBE2Q2LH0YL09 131 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 GFRA2O00451 464 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 PRNPP04156 253 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 CACNB3P54284 484 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 FKBP1AP62942 108 aaKnown RBP8.62□□□□□ -1.03
VPS50-211ENST00000474412 FAM160A1Q05DH4 1040 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 PDE4BQ07343 736 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 PUM3Q15397 648 aaKnown RBP8.62□□□□□ -1.03
VPS50-211ENST00000474412 DLGAP5Q15398 846 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 NKG7Q16617 165 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 SNAP47Q5SQN1 464 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 ATF7IPQ6VMQ6 1270 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 BNC2Q6ZN30 1099 aaPredicted RBP8.62□□□□□ -1.03
VPS50-211ENST00000474412 CCDC84Q86UT8 332 aaPredicted RBP8.62□□□□□ -1.03
VPS50-211ENST00000474412 APOBEC3FQ8IUX4 373 aaKnown RBP8.62□□□□□ -1.03
VPS50-211ENST00000474412 PLD6Q8N2A8 252 aaKnown RBP8.62□□□□□ -1.03
VPS50-211ENST00000474412 C2orf69Q8N8R5 385 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 FLCNQ8NFG4 579 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 NETO1Q8TDF5 533 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 FOXQ1Q9C009 403 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 VEZTQ9HBM0 779 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 GTF2IRD1Q9UHL9 959 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 HDAC9Q9UKV0 1011 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 TACC3Q9Y6A5 838 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 LOC285556D6RIA3 1793 aa8.62□□□□□ -1.03
VPS50-211ENST00000474412 BAZ2AQ9UIF9 1905 aaKnown RBP8.62□□□□□ -1.03
VPS50-211ENST00000474412 MINDY4BA8MYZ0 360 aa8.61□□□□□ -1.03
VPS50-211ENST00000474412 PGRP06401 933 aa8.61□□□□□ -1.03
VPS50-211ENST00000474412 ITIH2P19823 946 aa8.61□□□□□ -1.03
VPS50-211ENST00000474412 PHKA1P46020 1223 aa8.61□□□□□ -1.03
VPS50-211ENST00000474412 CRKP46108 304 aa8.61□□□□□ -1.03
VPS50-211ENST00000474412 RBM5P52756 815 aaKnown RBP eCLIP8.61□□□□□ -1.03
VPS50-211ENST00000474412 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
VPS50-211ENST00000474412 MAP2K1Q02750 393 aaPredicted RBP8.61□□□□□ -1.03
VPS50-211ENST00000474412 ATP2B3Q16720 1220 aa8.61□□□□□ -1.03
VPS50-211ENST00000474412 MIPEPQ99797 713 aa8.61□□□□□ -1.03
VPS50-211ENST00000474412 TDRD3Q9H7E2 651 aaKnown RBP8.61□□□□□ -1.03
VPS50-211ENST00000474412 OAS3Q9Y6K5 1087 aaKnown RBP8.61□□□□□ -1.03
VPS50-211ENST00000474412 SRGAP3O43295 1099 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 CEACAM5P06731 702 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 SLC5A1P13866 664 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 PRDX5P30044 214 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 MAP2K2P36507 400 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 NOGQ13253 232 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 SLBPQ14493 270 aaKnown RBP eCLIP8.6□□□□□ -1.03
VPS50-211ENST00000474412 NBPF12Q5TAG4 269 aaPredicted RBP8.6□□□□□ -1.03
VPS50-211ENST00000474412 TP53INP2Q8IXH6 220 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 ARHGAP45Q92619 1136 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 CLMNQ96JQ2 1002 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 RHOVQ96L33 236 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 FBXL18Q96ME1 805 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 DEFB129Q9H1M3 183 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 MKNK2Q9HBH9 465 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 COPRSQ9NQ92 184 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 KBTBD4Q9NVX7 518 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 ZNF70Q9UC06 446 aaPredicted RBP8.6□□□□□ -1.03
VPS50-211ENST00000474412 U3KQE9 123 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 RFX7Q2KHR2 1363 aa8.6□□□□□ -1.03
VPS50-211ENST00000474412 TCP10L2B9ZVM9 353 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 CIAO1O76071 339 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 F13A1P00488 732 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 IFIT1P09914 478 aaKnown RBP8.59□□□□□ -1.03
VPS50-211ENST00000474412 CAP2P40123 477 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 TFCP2Q12800 502 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 MTX1Q13505 466 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 IFI16Q16666 785 aaKnown RBP8.59□□□□□ -1.03
VPS50-211ENST00000474412 PRAMEF13Q5VWM6 474 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 ZKSCAN2Q63HK3 967 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 HS2ST1Q7LGA3 356 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 VPS37DQ86XT2 251 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 STK11IPQ8N1F8 1099 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 MFSD2AQ8NA29 543 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 GATAD2BQ8WXI9 593 aa8.59□□□□□ -1.03
VPS50-211ENST00000474412 LPIN2Q92539 896 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms