RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 NRBP1Q9UHY1 535 aa9.37□□□□□ -0.91
CNN3-205ENST00000474409 DDX41Q9UJV9 622 aaKnown RBP9.37□□□□□ -0.91
CNN3-205ENST00000474409 A0A1B0GVL5 298 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 DHX15O43143 795 aaKnown RBP9.36□□□□□ -0.91
CNN3-205ENST00000474409 INHAP05111 366 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 ZNF865P0CJ78 1059 aaPredicted RBP9.36□□□□□ -0.91
CNN3-205ENST00000474409 CYBAP13498 195 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 CMA1P23946 247 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 CDC25AP30304 524 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 GRK4P32298 578 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 SYKP43405 635 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 LBX1P52954 281 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 SP2Q02086 613 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 CYP4A11Q02928 519 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 TNFAIP2Q03169 654 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 FAM160A1Q05DH4 1040 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 TRIM32Q13049 653 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 PDIA5Q14554 519 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 KARSQ15046 597 aaKnown RBP9.36□□□□□ -0.91
CNN3-205ENST00000474409 DUSP28Q4G0W2 176 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 CELF3Q5SZQ8 465 aaKnown RBP9.36□□□□□ -0.91
CNN3-205ENST00000474409 GJC2Q5T442 439 aaPredicted RBP9.36□□□□□ -0.91
CNN3-205ENST00000474409 IQSEC1Q6DN90 963 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 MIS18BP1Q6P0N0 1132 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 METTL7BQ6UX53 244 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 TLK2Q86UE8 772 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 PDILTQ8N807 584 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 RDM1Q8NG50 284 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 OR6J1Q8NGC5 347 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 NEK9Q8TD19 979 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 COPS5Q92905 334 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 SPATA33Q96N06 139 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 PYM1Q9BRP8 204 aaKnown RBP9.36□□□□□ -0.91
CNN3-205ENST00000474409 CCSER1Q9C0I3 900 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 GOLPH3LQ9H4A5 285 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 DISC1Q9NRI5 854 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 FAM184BQ9ULE4 1060 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 TANC1Q9C0D5 1861 aa9.36□□□□□ -0.91
CNN3-205ENST00000474409 CENPFP49454 3210 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 IGSF9BQ9UPX0 1349 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 POTEB3A0JP26 581 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 EML1O00423 815 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 BACH1O14867 736 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 KINO60870 393 aaKnown RBP9.35□□□□□ -0.91
CNN3-205ENST00000474409 CCNE2O96020 404 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 PSAPP07602 524 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 SMPD1P17405 629 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 STAT6P42226 847 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 NDUFA8P51970 172 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 ACTR2P61160 394 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 CACNB2Q08289 660 aaPredicted RBP9.35□□□□□ -0.91
CNN3-205ENST00000474409 LAMC2Q13753 1193 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 EPHA7Q15375 998 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 SLC9C1Q4G0N8 1177 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 CCDC62Q6P9F0 684 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 POTEBQ6S5H4 581 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 USP49Q70CQ1 688 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 CTU1Q7Z7A3 348 aaKnown RBP9.35□□□□□ -0.91
CNN3-205ENST00000474409 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 LENG1Q96BZ8 264 aaPredicted RBP9.35□□□□□ -0.91
CNN3-205ENST00000474409 DHX58Q96C10 678 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 CCDC43Q96MW1 224 aaKnown RBP9.35□□□□□ -0.91
CNN3-205ENST00000474409 PLIN2Q99541 437 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 EIF2AK1Q9BQI3 630 aaKnown RBP9.35□□□□□ -0.91
CNN3-205ENST00000474409 LXNQ9BS40 222 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 NT5C3AQ9H0P0 336 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 AP5M1Q9H0R1 490 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 KCNH3Q9ULD8 1083 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 PTPN22Q9Y2R2 807 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 ALPK3Q96L96 1907 aa9.35□□□□□ -0.91
CNN3-205ENST00000474409 POTEFA5A3E0 1075 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 POLR2DO15514 142 aaKnown RBP9.34□□□□□ -0.91
CNN3-205ENST00000474409 SEPT4O43236 478 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 ADCY6O43306 1168 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 SLC26A4O43511 780 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 DKC1O60832 514 aaKnown RBP eCLIP9.34□□□□□ -0.91
CNN3-205ENST00000474409 MED24O75448 989 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 IGHA2P01877 340 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 SUPT20HL2P0C7V6 817 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 RARBP10826 455 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 LIG1P18858 919 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 PLCG1P19174 1290 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 PTGS1P23219 599 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 RPA1P27694 616 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 CCND3P30281 292 aaPredicted RBP9.34□□□□□ -0.91
CNN3-205ENST00000474409 TCF7P36402 384 aaPredicted RBP9.34□□□□□ -0.91
CNN3-205ENST00000474409 ARHGAP1Q07960 439 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 CTTNQ14247 550 aaKnown RBP9.34□□□□□ -0.91
CNN3-205ENST00000474409 SKOR2Q2VWA4 1001 aaPredicted RBP9.34□□□□□ -0.91
CNN3-205ENST00000474409 TMEM63BQ5T3F8 832 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 RRAGBQ5VZM2 374 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 FAM160B1Q5W0V3 765 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 POTEGQ6S5H5 508 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 B3GNT9Q6UX72 402 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 TPH2Q8IWU9 490 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 CEP57L1Q8IYX8 460 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 TRPV1Q8NER1 839 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 PPTC7Q8NI37 304 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 GPT2Q8TD30 523 aa9.34□□□□□ -0.91
CNN3-205ENST00000474409 SH3TC2Q8TF17 1288 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms