RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 CASTP20810 708 aaKnown RBP8.15□□□□□ -1.1
GPNMB-209ENST00000474157 BRD3Q15059 726 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 CLPPQ16740 277 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-209ENST00000474157 CLEC4GQ6UXB4 293 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 YTHDF3Q7Z739 585 aaKnown RBP8.15□□□□□ -1.1
GPNMB-209ENST00000474157 UBASH3BQ8TF42 649 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 SCLT1Q96NL6 688 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 GMLQ99445 158 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 MOV10L1Q9BXT6 1211 aaKnown RBP8.15□□□□□ -1.1
GPNMB-209ENST00000474157 BHMT2Q9H2M3 363 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 MMADHCQ9H3L0 296 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-209ENST00000474157 KIF9Q9HAQ2 790 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 KRT82Q9NSB4 513 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 CORO1CQ9ULV4 474 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-209ENST00000474157 FAN1Q9Y2M0 1017 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 KIF7Q2M1P5 1343 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 EVC2Q86UK5 1308 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 ADGRF5Q8IZF2 1346 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 GOLGB1Q14789 3259 aaKnown RBP8.14□□□□□ -1.11
GPNMB-209ENST00000474157 DLL1O00548 723 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 STK10O94804 968 aaKnown RBP8.14□□□□□ -1.11
GPNMB-209ENST00000474157 XBP1P17861 261 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 ATF4P18848 351 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-209ENST00000474157 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-209ENST00000474157 MCM3P25205 808 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 SAFB2Q14151 953 aaKnown RBP eCLIP8.14□□□□□ -1.11
GPNMB-209ENST00000474157 ELF2Q15723 593 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 PKN1Q16512 942 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 SCARA3Q6AZY7 606 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 TLDC1Q6P9B6 456 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 CEP57Q86XR8 500 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 TRIM58Q8NG06 486 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 NUP133Q8WUM0 1156 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 NKD1Q969G9 470 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 PPP2R3CQ969Q6 453 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 DHTKD1Q96HY7 919 aaPredicted RBP8.14□□□□□ -1.11
GPNMB-209ENST00000474157 CDK5RAP3Q96JB5 506 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 SPATA32Q96LK8 384 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 UIMC1Q96RL1 719 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 TSGA10Q9BZW7 698 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 METTL14Q9HCE5 456 aaKnown RBP8.14□□□□□ -1.11
GPNMB-209ENST00000474157 CACNA2D2Q9NY47 1150 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 PYCARDQ9ULZ3 195 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 EFR3BQ9Y2G0 817 aa8.14□□□□□ -1.11
GPNMB-209ENST00000474157 PPIP5K1Q6PFW1 1433 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 ADCY9O60503 1353 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 SPDYE3A6NKU9 549 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 GOLGA8AA7E2F4 631 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 PIK3R2O00459 728 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 CILPO75339 1184 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 BPNT1O95861 308 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 DLGAP3O95886 979 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 PENKP01210 267 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-209ENST00000474157 PAPOLAP51003 745 aaKnown RBP8.13□□□□□ -1.11
GPNMB-209ENST00000474157 EIF2B5Q13144 721 aaKnown RBP8.13□□□□□ -1.11
GPNMB-209ENST00000474157 CUL3Q13618 768 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 MPP2Q14168 576 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 SEZ6Q53EL9 994 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 CCDC93Q567U6 631 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 CCDC183Q5T5S1 534 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 KCNV1Q6PIU1 500 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 MARCH10Q8NA82 808 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-209ENST00000474157 ATP11CQ8NB49 1132 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 ZSCAN1Q8NBB4 408 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 FAM71BQ8TC56 605 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 CCDC47Q96A33 483 aaKnown RBP8.13□□□□□ -1.11
GPNMB-209ENST00000474157 RBM41Q96IZ5 413 aaKnown RBP8.13□□□□□ -1.11
GPNMB-209ENST00000474157 DHRS1Q96LJ7 313 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.13□□□□□ -1.11
GPNMB-209ENST00000474157 LRRC3Q9BY71 257 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 TRIM4Q9C037 500 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 GBP3Q9H0R5 595 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 GINM1Q9NU53 330 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 IFT57Q9NWB7 429 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 PCDHA4Q9UN74 947 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 SUGT1Q9Y2Z0 365 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 ATP6V0A2Q9Y487 856 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 COMMD10Q9Y6G5 202 aa8.13□□□□□ -1.11
GPNMB-209ENST00000474157 ABCA3Q99758 1704 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 MAP2K7O14733 419 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 CREB3O43889 395 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 SH3BP5O60239 455 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 ZNF862O60290 1169 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 KDM1AO60341 852 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 WISP1O95388 367 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 FGRP09769 529 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 FOSL1P15407 271 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 DESP17661 470 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 CYP11B2P19099 503 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 TRIM21P19474 475 aaKnown RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 RPL13P26373 211 aaKnown RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 HOXA10P31260 410 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 POU5F1Q01860 360 aaKnown RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 RPL6Q02878 288 aaKnown RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 TRIM28Q13263 835 aaKnown RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 DUOXA2Q1HG44 320 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 CWF19L2Q2TBE0 894 aaKnown RBP8.12□□□□□ -1.11
GPNMB-209ENST00000474157 USH1GQ495M9 461 aa8.12□□□□□ -1.11
GPNMB-209ENST00000474157 PARP10Q53GL7 1025 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms