RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 UBE2Q2LH0YL09 131 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 APAF1O14727 1248 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 SASH1O94885 1247 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 CEACAM5P06731 702 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 GRK4P32298 578 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 PRMT2P55345 433 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 FANCCQ00597 558 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 CHRNDQ07001 517 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 GCKRQ14397 625 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 KIF22Q14807 665 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 NKPD1Q17RQ9 610 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 VPS37DQ86XT2 251 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 KIAA0825Q8IV33 1275 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 PPP1R13LQ8WUF5 828 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 DNAAF4Q8WXU2 420 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 PHAXQ9H814 394 aaKnown RBP4.39□□□□□ -1.71
XRN1-209ENST00000472625 VEZTQ9HBM0 779 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 CD209Q9NNX6 404 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 PICK1Q9NRD5 415 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 TRIM17Q9Y577 477 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 TACC3Q9Y6A5 838 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 PSME4Q14997 1843 aa4.39□□□□□ -1.71
XRN1-209ENST00000472625 ELL2O00472 640 aaPredicted RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 LRIG2O94898 1065 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 TBC1D8O95759 1140 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 IGKV5-2P06315 115 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 CSF1RP07333 972 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 RNASE1P07998 156 aaKnown RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 IL1R1P14778 569 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 VAMP1P23763 118 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 GTF2A2P52657 109 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 RBM5P52756 815 aaKnown RBP eCLIP4.38□□□□□ -1.71
XRN1-209ENST00000472625 SP3Q02447 781 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 FAM160A1Q05DH4 1040 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 DDX10Q13206 875 aaKnown RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 UBE4AQ14139 1066 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 TSNAXIP1Q2TAA8 658 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 CFAP100Q494V2 611 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 SLC9C1Q4G0N8 1177 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 CAVIN4Q5BKX8 364 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 DCAF15Q66K64 600 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 OTOP1Q7RTM1 612 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 METTL16Q86W50 562 aaKnown RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 SPACA3Q8IXA5 215 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 MRPL41Q8IXM3 137 aaKnown RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 ELMO3Q96BJ8 720 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 ARMC5Q96C12 935 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 ZBED3Q96IU2 234 aaPredicted RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 WNK4Q96J92 1243 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 LRRC3Q9BY71 257 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 MIR1-1HGQ9H1L0 117 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 RC3H2Q9HBD1 1191 aaKnown RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 CNNM1Q9NRU3 951 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 MBNL3Q9NUK0 354 aaKnown RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 SUGT1Q9Y2Z0 365 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 ASTN2O75129 1339 aaPredicted RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 MROH5Q6ZUA9 1318 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 KIF16BQ96L93 1317 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 AKAP11Q9UKA4 1901 aa4.38□□□□□ -1.71
XRN1-209ENST00000472625 RPAP1Q9BWH6 1393 aaPredicted RBP4.38□□□□□ -1.71
XRN1-209ENST00000472625 UPK3BL1B0FP48 263 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 UPK3BL2E5RIL1 263 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 GRM8O00222 908 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 IGF2BP3O00425 579 aaKnown RBP eCLIP4.37□□□□□ -1.71
XRN1-209ENST00000472625 FRAT2O75474 233 aaPredicted RBP4.37□□□□□ -1.71
XRN1-209ENST00000472625 ALDH1L1O75891 902 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 CST3P01034 146 aaPredicted RBP4.37□□□□□ -1.71
XRN1-209ENST00000472625 CETPP11597 493 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 RLBP1P12271 317 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 FUT4P22083 530 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 RACK1P63244 317 aaKnown RBP4.37□□□□□ -1.71
XRN1-209ENST00000472625 HDLBPQ00341 1268 aaKnown RBP4.37□□□□□ -1.71
XRN1-209ENST00000472625 RASA3Q14644 834 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 IFI16Q16666 785 aaKnown RBP4.37□□□□□ -1.71
XRN1-209ENST00000472625 CWF19L2Q2TBE0 894 aaKnown RBP4.37□□□□□ -1.71
XRN1-209ENST00000472625 TMEM201Q5SNT2 666 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 MFSD14BQ5SR56 506 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 FKBP1CQ5VVH2 108 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 PRAMEF13Q5VWM6 474 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 LDHAL6AQ6ZMR3 332 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 HDXQ7Z353 690 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 WDR63Q8IWG1 891 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 STK11IPQ8N1F8 1099 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 C8orf58Q8NAV2 365 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 LRRN4CLQ8ND94 238 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 DNAJB8Q8NHS0 232 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 JARID2Q92833 1246 aaPredicted RBP4.37□□□□□ -1.71
XRN1-209ENST00000472625 TEKT1Q969V4 418 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 ZNF428Q96B54 188 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 ASIC4Q96FT7 647 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 MKNK2Q9HBH9 465 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 C9orf78Q9NZ63 289 aaPredicted RBP4.37□□□□□ -1.71
XRN1-209ENST00000472625 HDAC5Q9UQL6 1122 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 PTPN22Q9Y2R2 807 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.37□□□□□ -1.71
XRN1-209ENST00000472625 FAM205AQ6ZU69 1335 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 FANCIQ9NVI1 1328 aa4.37□□□□□ -1.71
XRN1-209ENST00000472625 SCN9AQ15858 1988 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 CASP8AP2Q9UKL3 1982 aa4.36□□□□□ -1.71
XRN1-209ENST00000472625 CCL15-CCL14A0A0B4J2E2 113 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms