RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PIGSQ96S52 555 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 TRPV6Q9H1D0 765 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 ALDH8A1Q9H2A2 487 aaPredicted RBP10.54□□□□□ -0.72
SMC4-213ENST00000472282 TTYH1Q9H313 450 aaPredicted RBP10.54□□□□□ -0.72
SMC4-213ENST00000472282 RIOX1Q9H6W3 641 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 RBM28Q9NW13 759 aaKnown RBP10.54□□□□□ -0.72
SMC4-213ENST00000472282 STXBP5LQ9Y2K9 1186 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 Q9Y3F1 56 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 ABCB11O95342 1321 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 MROH7Q68CQ1 1323 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 CNTNAP5Q8WYK1 1306 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 TET1Q8NFU7 2136 aa10.54□□□□□ -0.72
SMC4-213ENST00000472282 LOC102724159A0A0B4J2E5 919 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 ZBTB5O15062 677 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 MMP16P51512 607 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 CCT2P78371 535 aaKnown RBP10.53□□□□□ -0.72
SMC4-213ENST00000472282 PDE4DQ08499 809 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 STK3Q13188 491 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 PWP2Q15269 919 aaKnown RBP10.53□□□□□ -0.72
SMC4-213ENST00000472282 RABEP1Q15276 862 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 ANKRD1Q15327 319 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 CCDC82Q8N4S0 544 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 DNERQ8NFT8 737 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 OR6J1Q8NGC5 347 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 USB1Q9BQ65 265 aaKnown RBP10.53□□□□□ -0.72
SMC4-213ENST00000472282 LZTS2Q9BRK4 669 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 NCOA5Q9HCD5 579 aaKnown RBP10.53□□□□□ -0.72
SMC4-213ENST00000472282 FAM217BQ9NTX9 383 aaPredicted RBP10.53□□□□□ -0.72
SMC4-213ENST00000472282 TPCN1Q9ULQ1 816 aa10.53□□□□□ -0.72
SMC4-213ENST00000472282 hCG_1642624A0A1W2PR95 340 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 GRXCR1A8MXD5 290 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 WNT7AO00755 349 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 TLR3O15455 904 aaKnown RBP10.52□□□□□ -0.73
SMC4-213ENST00000472282 CABYRO75952 493 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 LARGE1O95461 756 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 MYL3P08590 195 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 SMARCA1P28370 1054 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 ADD1P35611 737 aaKnown RBP10.52□□□□□ -0.73
SMC4-213ENST00000472282 SMAD3P84022 425 aaKnown RBP10.52□□□□□ -0.73
SMC4-213ENST00000472282 PURAQ00577 322 aaKnown RBP10.52□□□□□ -0.73
SMC4-213ENST00000472282 TMEM240Q5SV17 173 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 ZNF365Q70YC5 407 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 FBXO11Q86XK2 927 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 SLC17A8Q8NDX2 589 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 RGS22Q8NE09 1264 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 VWCEQ96DN2 955 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 RRP36Q96EU6 259 aaKnown RBP10.52□□□□□ -0.73
SMC4-213ENST00000472282 ZNF274Q96GC6 653 aaPredicted RBP10.52□□□□□ -0.73
SMC4-213ENST00000472282 WNT8AQ9H1J5 351 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 SEMA6BQ9H3T3 888 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 PNMA2Q9UL42 364 aa10.52□□□□□ -0.73
SMC4-213ENST00000472282 PNMA6FA0A0J9YX94 578 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 CCDC196A0A1B0GTZ2 297 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 CFBP00751 764 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 TXNP10599 105 aaKnown RBP10.51□□□□□ -0.73
SMC4-213ENST00000472282 CYP2C9P11712 490 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 EIF2AK2P19525 551 aaKnown RBP10.51□□□□□ -0.73
SMC4-213ENST00000472282 CCL23P55773 120 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 PPP2R5BQ15173 497 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 ME3Q16798 604 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 RASIP1Q5U651 963 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 CCDC62Q6P9F0 684 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 SEPT14Q6ZU15 432 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 SCFD2Q8WU76 684 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 CDX2Q99626 313 aaPredicted RBP10.51□□□□□ -0.73
SMC4-213ENST00000472282 NOC4LQ9BVI4 516 aaKnown RBP10.51□□□□□ -0.73
SMC4-213ENST00000472282 AMNQ9BXJ7 453 aa10.51□□□□□ -0.73
SMC4-213ENST00000472282 TRMT13Q9NUP7 481 aaKnown RBP10.51□□□□□ -0.73
SMC4-213ENST00000472282 SEC63Q9UGP8 760 aaKnown RBP10.51□□□□□ -0.73
SMC4-213ENST00000472282 A6NJR5 290 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 ZEB2O60315 1214 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 PFKFB2O60825 505 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 HOXA13P31271 388 aaPredicted RBP10.5□□□□□ -0.73
SMC4-213ENST00000472282 SMCPP49901 116 aaPredicted RBP10.5□□□□□ -0.73
SMC4-213ENST00000472282 HSD17B4P51659 736 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 SCRN1Q12765 414 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 PPIGQ13427 754 aaKnown RBP eCLIP10.5□□□□□ -0.732e-27■■■■■ 81.9
SMC4-213ENST00000472282 NTRK3Q16288 839 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 LY6KQ17RY6 165 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 NBPF20Q3BBV1 942 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 TMEM199Q8N511 208 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 IL31RAQ8NI17 732 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 MYLIPQ8WY64 445 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 PHKBQ93100 1093 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 SCLYQ96I15 445 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 RMDN3Q96TC7 470 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 MTG1Q9BT17 334 aaPredicted RBP10.5□□□□□ -0.73
SMC4-213ENST00000472282 SLKQ9H2G2 1235 aaPredicted RBP10.5□□□□□ -0.73
SMC4-213ENST00000472282 HIPK3Q9H422 1215 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 IL23AQ9NPF7 189 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 PXMP2Q9NR77 195 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 CXXC1Q9P0U4 656 aaPredicted RBP10.5□□□□□ -0.73
SMC4-213ENST00000472282 MRPL11Q9Y3B7 192 aaKnown RBP10.5□□□□□ -0.73
SMC4-213ENST00000472282 PCDHA1Q9Y5I3 950 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 COL6A3P12111 3177 aa10.5□□□□□ -0.73
SMC4-213ENST00000472282 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms