RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TSG101Q99816 390 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 BMP2KQ9NSY1 1161 aaPredicted RBP16.64■□□□□ 0.25
UBXN11-213ENST00000472155 WRAP73Q9P2S5 460 aaPredicted RBP16.64■□□□□ 0.25
UBXN11-213ENST00000472155 SALL4Q9UJQ4 1053 aa16.64■□□□□ 0.25
UBXN11-213ENST00000472155 A0A1W2PQJ5 194 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 EIF3CLB5ME19 914 aaKnown RBP16.63■□□□□ 0.25
UBXN11-213ENST00000472155 RPA1P27694 616 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 FIGNQ5HY92 759 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 KSR1Q8IVT5 923 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 CCDC42Q96M95 316 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 DRC1Q96MC2 740 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 EIF3CQ99613 913 aaKnown RBP16.63■□□□□ 0.25
UBXN11-213ENST00000472155 EIF2AK1Q9BQI3 630 aaKnown RBP16.63■□□□□ 0.25
UBXN11-213ENST00000472155 GLT8D2Q9H1C3 349 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 CAPN6Q9Y6Q1 641 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 PCNTO95613 3336 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 FRMD3A2A2Y4 597 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 TLR2O60603 784 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 HMGB2P26583 209 aaKnown RBP16.63■□□□□ 0.25
UBXN11-213ENST00000472155 ENOX2Q16206 610 aaKnown RBP16.63■□□□□ 0.25
UBXN11-213ENST00000472155 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 MMS19Q96T76 1030 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 HINFPQ9BQA5 517 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
UBXN11-213ENST00000472155 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
UBXN11-213ENST00000472155 CYLC1P35663 651 aaPredicted RBP16.62■□□□□ 0.25
UBXN11-213ENST00000472155 GFPT1Q06210 699 aaPredicted RBP16.62■□□□□ 0.25
UBXN11-213ENST00000472155 ADAM9Q13443 819 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 MOXD1Q6UVY6 613 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 TRAPPC11Q7Z392 1133 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 LRRC27Q9C0I9 530 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 DNM3Q9UQ16 869 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 ACTN1P12814 892 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 CIITAP33076 1130 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 KIF11P52732 1056 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 DNAAF5Q86Y56 855 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 OGFOD1Q8N543 542 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 SYT2Q8N9I0 419 aaPredicted RBP16.62■□□□□ 0.25
UBXN11-213ENST00000472155 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 AGBL1Q96MI9 1066 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 ARHGEF10LQ9HCE6 1279 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 PKD2L1Q9P0L9 805 aa16.62■□□□□ 0.25
UBXN11-213ENST00000472155 ARP10275 920 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 ARID5AQ03989 594 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 BMS1Q14692 1282 aaKnown RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 HGSNATQ68CP4 663 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 HAUS3Q68CZ6 603 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 TRIM59Q8IWR1 403 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 TPH2Q8IWU9 490 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 LSM14BQ9BX40 385 aaKnown RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 PSME4Q14997 1843 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 PDE2AO00408 941 aaPredicted RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 MOCS3O95396 460 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 HNRNPH3P31942 346 aaKnown RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 INPP5BP32019 993 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 CASP4P49662 377 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 POLR2FP61218 127 aaKnown RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 KRT83P78385 493 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 PSMB7Q99436 277 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 GTPBP4Q9BZE4 634 aaKnown RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 ZCCHC17Q9NP64 241 aaKnown RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 ARGLU1Q9NWB6 273 aaPredicted RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 MYO1AQ9UBC5 1043 aa16.61■□□□□ 0.25
UBXN11-213ENST00000472155 ASTN2O75129 1339 aaPredicted RBP16.61■□□□□ 0.25
UBXN11-213ENST00000472155 CLIC2O15247 247 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 FOSP01100 380 aaPredicted RBP16.6■□□□□ 0.25
UBXN11-213ENST00000472155 NR2F2P24468 414 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 VSNL1P62760 191 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 CXCL9Q07325 125 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 PDXDC1Q6P996 788 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 CCDC170Q8IYT3 715 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 CEP112Q8N8E3 955 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 NEK11Q8NG66 645 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 IFIH1Q9BYX4 1025 aaKnown RBP16.6■□□□□ 0.25
UBXN11-213ENST00000472155 SMARCAL1Q9NZC9 954 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 PCDHA13Q9Y5I0 950 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 WNT10BO00744 389 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 SLITRK3O94933 977 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 VAV2P52735 878 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 ZC2HC1CQ53FD0 456 aaPredicted RBP16.6■□□□□ 0.25
UBXN11-213ENST00000472155 OTOP1Q7RTM1 612 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 CACNA2D4Q7Z3S7 1137 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 PGAP2Q9UHJ9 254 aa16.6■□□□□ 0.25
UBXN11-213ENST00000472155 FAM170AA1A519 330 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 CTAGE15A4D2H0 777 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 DDX39AO00148 427 aaKnown RBP16.59■□□□□ 0.25
UBXN11-213ENST00000472155 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 TBX3O15119 743 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 KRT86O43790 486 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 CTAGE8P0CG41 777 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 CAP2P40123 477 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 MRPS25P82663 173 aaKnown RBP16.59■□□□□ 0.25
UBXN11-213ENST00000472155 CTAGE6Q86UF2 777 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 CTAGE4Q8IX94 777 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 FAM20AQ96MK3 541 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 PURBQ96QR8 312 aaKnown RBP16.59■□□□□ 0.25
UBXN11-213ENST00000472155 FUT8Q9BYC5 575 aa16.59■□□□□ 0.25
UBXN11-213ENST00000472155 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms