RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 AFG3L2Q9Y4W6 797 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 TACC3Q9Y6A5 838 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDAC8-216ENST00000470998 ZHX2Q9Y6X8 837 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 FLT1P17948 1338 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 ADGRA2Q96PE1 1338 aa6.41□□□□□ -1.38
HDAC8-216ENST00000470998 HLA-DOAP06340 250 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 SLFN14P0C7P3 912 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 TOP1P11387 765 aaKnown RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 RASA1P20936 1047 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 GNA11P29992 359 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 LONP1P36776 959 aaKnown RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 PPP1R2P41236 205 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 PSMC4P43686 418 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 FCGRTP55899 365 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 NLRP5P59047 1200 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 ATP2C1P98194 919 aaPredicted RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 NFX1Q12986 1120 aaKnown RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 PABPC4Q13310 644 aaKnown RBP eCLIP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 PICALMQ13492 652 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 POSTNQ15063 836 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 TTC38Q5R3I4 469 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 RCSD1Q6JBY9 416 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 GPAT2Q6NUI2 795 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 RIPOR1Q6ZS17 1223 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 KRT25Q7Z3Z0 450 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 MTERF4Q7Z6M4 381 aaKnown RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 RAB11FIP4Q86YS3 637 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 FOXP4Q8IVH2 680 aaPredicted RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 ZFPM1Q8IX07 1006 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 IQUBQ8NA54 791 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 CCDC112Q8NEF3 446 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 SPATA20Q8TB22 786 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 KIAA1524Q8TCG1 905 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 RHBDD1Q8TEB9 315 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 SH3RF3Q8TEJ3 882 aaPredicted RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 TNFRSF25Q93038 417 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 SMARCE1Q969G3 411 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 CCDC17Q96LX7 622 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 AK8Q96MA6 479 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 AIFM3Q96NN9 605 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 GSDMAQ96QA5 445 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 GAS2L1Q99501 681 aaPredicted RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 NAP1L4Q99733 375 aaKnown RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 GRIP2Q9C0E4 1043 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 CUEDC2Q9H467 287 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 AS3MTQ9HBK9 375 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 TIMMDC1Q9NPL8 285 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 KCND1Q9NSA2 647 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 RMND1Q9NWS8 449 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 BARHL2Q9NY43 387 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 PI4KBQ9UBF8 816 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 CLIP2Q9UDT6 1046 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 SEC63Q9UGP8 760 aaKnown RBP6.4□□□□□ -1.38
HDAC8-216ENST00000470998 SRRDQ9UH36 339 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 PCDHA4Q9UN74 947 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 AGTPBP1Q9UPW5 1226 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 PCDHGA11Q9Y5H2 935 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 PTCH2Q9Y6C5 1203 aa6.4□□□□□ -1.38
HDAC8-216ENST00000470998 OTOFQ9HC10 1997 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 CCDC194A0A1B0GVG4 234 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 SLC35F4A4IF30 521 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 SLC26A4O43511 780 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 PRDM1O75626 825 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 PLEKHA8P1O95397 391 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 PARP1P09874 1014 aaKnown RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 BCRP11274 1271 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 MARCKSP29966 332 aaPredicted RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 GUCY1A2P33402 732 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 CAP2P40123 477 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 PHKA2P46019 1235 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 GCLCP48506 637 aaPredicted RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 TOB1P50616 345 aaPredicted RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 UBXN2AP68543 259 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 TRAF1Q13077 416 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 NOLC1Q14978 699 aaKnown RBP eCLIP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 SLC4A8Q2Y0W8 1093 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 DPCR1Q3MIW9 517 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 GPATCH4Q5T3I0 446 aaKnown RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 C11orf57Q6ZUT1 292 aaPredicted RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 METTL16Q86W50 562 aaKnown RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 DHX40Q8IX18 779 aaKnown RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 DRC7Q8IY82 874 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 BLIDQ8IZY5 108 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 STK11IPQ8N1F8 1099 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 SRBD1Q8N5C6 995 aaKnown RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 AOPEPQ8N6M6 819 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 ZNF280CQ8ND82 737 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 ENOX1Q8TC92 643 aaKnown RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 RAET1EQ8TD07 263 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 TGFBRAP1Q8WUH2 860 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 RRP36Q96EU6 259 aaKnown RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 C6orf50Q9HD87 102 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 CABP5Q9NP86 173 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 VPS54Q9P1Q0 977 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 CPA4Q9UI42 421 aa6.39□□□□□ -1.39
HDAC8-216ENST00000470998 DDX60LQ5H9U9 1706 aaKnown RBP6.39□□□□□ -1.39
HDAC8-216ENST00000470998 MYH15Q9Y2K3 1946 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 CYP2D7A0A087X1C5 515 aa6.38□□□□□ -1.39
HDAC8-216ENST00000470998 SPATA31C2B4DYI2 1134 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms