RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 RAB27AP51159 221 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 RBM5P52756 815 aaKnown RBP eCLIP10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 SLMAPQ14BN4 828 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 NPY5RQ15761 445 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 TMEM60Q9H2L4 133 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 AZI2Q9H6S1 392 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 LTN1O94822 1766 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 TCRBV5S4A2TA0A5A2 114 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 RGS16O15492 202 aaPredicted RBP10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 GSTA1P08263 222 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 HNRNPH3P31942 346 aaKnown RBP10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 PAPOLAP51003 745 aaKnown RBP10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 NCALDP61601 193 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 TRAF1Q13077 416 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 RIPK1Q13546 671 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 BLMHQ13867 455 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 NAB2Q15742 525 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 DYMQ7RTS9 669 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 DAAM2Q86T65 1068 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 NSRP1Q9H0G5 558 aaKnown RBP10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 G3BP2Q9UN86 482 aaKnown RBP10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 NOC2LQ9Y3T9 749 aaKnown RBP10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 ABCC12Q96J65 1359 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 A0A087X0T9 212 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 FAM228BP0C875 321 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 IFI35P80217 286 aaPredicted RBP10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 ALX1Q15699 326 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 MAN2A1Q16706 1144 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 GIGYF2Q6Y7W6 1299 aaKnown RBP10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 HOOK3Q86VS8 718 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 FAM133AQ8N9E0 248 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 TTLL11Q8NHH1 800 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 BAP1Q92560 729 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 TNFRSF25Q93038 417 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 SEMA6BQ9H3T3 888 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 GREM2Q9H772 168 aa10.41□□□□□ -0.74
NHLRC3-203ENST00000470258 GOLGA6L10A0A0M3HER8 536 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 DPPA5A6NC42 116 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 PGRMC1O00264 195 aaKnown RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 LUC7L3O95232 432 aaKnown RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 LCA5LO95447 670 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 COPB2P35606 906 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 KLHL30Q0D2K2 578 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 ZNF268Q14587 947 aaPredicted RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 LRRC41Q15345 812 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 INF2Q27J81 1249 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 SLC4A8Q2Y0W8 1093 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 ZSCAN29Q8IWY8 852 aaPredicted RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 IFNL2Q8IZJ0 200 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 ZNF317Q96PQ6 595 aaPredicted RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 ZSCAN10Q96SZ4 725 aaPredicted RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 FMO2Q99518 471 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 LSM14BQ9BX40 385 aaKnown RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 NUCKS1Q9H1E3 243 aaKnown RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 LRP2BPQ9P2M1 347 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 UTP11Q9Y3A2 253 aaKnown RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 C5P01031 1676 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 MYH7BA7E2Y1 1941 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 LRRD1A4D1F6 860 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 LGR5O75473 907 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 SCG2P13521 617 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 SOGA3Q5TF21 947 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 OTUD6AQ7L8S5 288 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 SRBD1Q8N5C6 995 aaKnown RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 SPATA5Q8NB90 893 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 LRRC15Q8TF66 581 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 NAF1Q96HR8 494 aaKnown RBP10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 TRIM9Q9C026 710 aa10.4□□□□□ -0.74
NHLRC3-203ENST00000470258 ANKRD33BA6NCL7 494 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 NMT2O60551 498 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 HIP1RO75146 1068 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 MSH2P43246 934 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 ITIH4Q14624 930 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 HGSNATQ68CP4 663 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 DENND2CQ68D51 928 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 CABP7Q86V35 215 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 ANKS1AQ92625 1134 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 PIDD1Q9HB75 910 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 TCP11L1Q9NUJ3 509 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 FGFR1OP2Q9NVK5 253 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 ABCF2Q9UG63 623 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 FAM205AQ6ZU69 1335 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 SPDYE5A6NIY4 337 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 SPDYE3A6NKU9 549 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 H0Y3Z8 333 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 STXBP3O00186 592 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 CLSTN1O94985 981 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 RARAP10276 462 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 RANBP1P43487 201 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 PLTPP55058 493 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 POLE2P56282 527 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 FUT2Q10981 343 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 FAM83BQ5T0W9 1011 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 TEKT4Q8WW24 435 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 KBTBD4Q9NVX7 518 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 SH3BP1Q9Y3L3 701 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 SPEF2Q9C093 1822 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 AFF2P51816 1311 aa10.39□□□□□ -0.75
NHLRC3-203ENST00000470258 ASAP2O43150 1006 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms