RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 EPHA5P54756 1037 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 TMPRSS15P98073 1019 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 GRIN1Q05586 938 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 SEC23AQ15436 765 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 MCTP1Q6DN14 999 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.72□□□□□ -1.49
VPS8-220ENST00000469713 NLGN4XQ8N0W4 816 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 ARRDC4Q8NCT1 418 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 PHOSPHO1Q8TCT1 267 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 CLEC4DQ8WXI8 215 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 TSPAN17Q96FV3 270 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 FMNL2Q96PY5 1086 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 HOMER2Q9NSB8 354 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 NUB1Q9Y5A7 615 aa5.72□□□□□ -1.49
VPS8-220ENST00000469713 FAM90A27PA6NNH2 459 aa5.71□□□□□ -1.5
VPS8-220ENST00000469713 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.71□□□□□ -1.5
VPS8-220ENST00000469713 H7C1D1 291 aa5.71□□□□□ -1.5
VPS8-220ENST00000469713 CLASP2O75122 1294 aaKnown RBP5.71□□□□□ -1.5
VPS8-220ENST00000469713 HIP1RO75146 1068 aa5.71□□□□□ -1.5
VPS8-220ENST00000469713 ITGB5P18084 799 aa5.71□□□□□ -1.5
VPS8-220ENST00000469713 IRF2BP1Q8IU81 584 aa5.71□□□□□ -1.5
VPS8-220ENST00000469713 EMC7Q9NPA0 242 aa5.71□□□□□ -1.5
VPS8-220ENST00000469713 PLA2G2DQ9UNK4 145 aa5.71□□□□□ -1.5
VPS8-220ENST00000469713 APOBEC2Q9Y235 224 aaKnown RBP5.71□□□□□ -1.5
VPS8-220ENST00000469713 B3GALT1Q9Y5Z6 326 aa5.71□□□□□ -1.5
VPS8-220ENST00000469713 PHLDB1Q86UU1 1377 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 ZNF503-AS2A6NEH8 195 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 TGM5O43548 720 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 RAB11FIP3O75154 756 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 ZBTB7AO95365 584 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 HMGB1P09429 215 aaKnown RBP5.7□□□□□ -1.5
VPS8-220ENST00000469713 PTPN1P18031 435 aaKnown RBP5.7□□□□□ -1.5
VPS8-220ENST00000469713 SLC9A1P19634 815 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 GUCY2FP51841 1108 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 KIF11P52732 1056 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 YBX1P67809 324 aaKnown RBP5.7□□□□□ -1.5
VPS8-220ENST00000469713 OCRLQ01968 901 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 SLC9A5Q14940 896 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 ATP13A4Q4VNC1 1196 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 RNF219Q5W0B1 726 aaPredicted RBP5.7□□□□□ -1.5
VPS8-220ENST00000469713 BTBD8Q5XKL5 378 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 ZC3H14Q6PJT7 736 aaKnown RBP5.7□□□□□ -1.5
VPS8-220ENST00000469713 TMC6Q7Z403 805 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 SPATS2Q86XZ4 545 aaKnown RBP5.7□□□□□ -1.5
VPS8-220ENST00000469713 TRIM48Q8IWZ4 208 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 EFHBQ8N7U6 833 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 KIAA1958Q8N8K9 716 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 COG1Q8WTW3 980 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 FAM168AQ92567 244 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 DLG3Q92796 817 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 LIN37Q96GY3 246 aaPredicted RBP5.7□□□□□ -1.5
VPS8-220ENST00000469713 RIC8BQ9NVN3 520 aa5.7□□□□□ -1.5
VPS8-220ENST00000469713 CARMIL2Q6F5E8 1435 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 ALG1L2C9J202 215 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 ACOT7O00154 380 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 BUB1BO60566 1050 aaPredicted RBP5.69□□□□□ -1.5
VPS8-220ENST00000469713 C4BPAP04003 597 aaKnown RBP5.69□□□□□ -1.5
VPS8-220ENST00000469713 PDGFRBP09619 1106 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 PMLP29590 882 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 VIPR1P32241 457 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 TMEM62Q0P6H9 643 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 TMEM132BQ14DG7 1078 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 ZNF174Q15697 407 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 BRDTQ58F21 947 aaPredicted RBP5.69□□□□□ -1.5
VPS8-220ENST00000469713 MPZL3Q6UWV2 235 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 ZNF605Q86T29 641 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 FERMT3Q86UX7 667 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 C11orf74Q86VG3 221 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 ALG3Q92685 438 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 ELF4Q99607 663 aaPredicted RBP5.69□□□□□ -1.5
VPS8-220ENST00000469713 PCIF1Q9H4Z3 704 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 ZNF552Q9H707 407 aaPredicted RBP5.69□□□□□ -1.5
VPS8-220ENST00000469713 KCNH7Q9NS40 1196 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 TYW1Q9NV66 732 aaKnown RBP5.69□□□□□ -1.5
VPS8-220ENST00000469713 SLC5A4Q9NY91 659 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 SPO11Q9Y5K1 396 aa5.69□□□□□ -1.5
VPS8-220ENST00000469713 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.68□□□□□ -1.5
VPS8-220ENST00000469713 PRAMEF25A6NGN4 478 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 ABLIM1O14639 778 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 KATNA1O75449 491 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 PTX3P26022 381 aaPredicted RBP5.68□□□□□ -1.5
VPS8-220ENST00000469713 GJA4P35212 333 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 ZNF200P98182 395 aaPredicted RBP5.68□□□□□ -1.5
VPS8-220ENST00000469713 PAN2Q504Q3 1202 aaKnown RBP5.68□□□□□ -1.5
VPS8-220ENST00000469713 HDGFL2Q7Z4V5 671 aaPredicted RBP5.68□□□□□ -1.5
VPS8-220ENST00000469713 NECAB2Q7Z6G3 386 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 FAM126BQ8IXS8 530 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 TTLL11Q8NHH1 800 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 SLC5A5Q92911 643 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 PDGFDQ9GZP0 370 aaPredicted RBP5.68□□□□□ -1.5
VPS8-220ENST00000469713 TOMM22Q9NS69 142 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 WASHC2CQ9Y4E1 1318 aa5.68□□□□□ -1.5
VPS8-220ENST00000469713 RASSF10A6NK89 507 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 PRKD3O94806 890 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 FAHP16930 419 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 JUNBP17275 347 aaPredicted RBP5.67□□□□□ -1.5
VPS8-220ENST00000469713 STAT5AP42229 794 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 IRAK1P51617 712 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 DDB1Q16531 1140 aa5.67□□□□□ -1.5
VPS8-220ENST00000469713 PLEKHG6Q3KR16 790 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms