RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 C2CD5Q86YS7 1000 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 SYNE4Q8N205 404 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 C19orf47Q8N9M1 422 aaKnown RBP6.33□□□□□ -1.4
U2AF1-207ENST00000468039 PLBD2Q8NHP8 589 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 MYD88Q99836 296 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 STK31Q9BXU1 1019 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 GPR62Q9BZJ7 368 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 SUCOQ9UBS9 1254 aaKnown RBP6.33□□□□□ -1.4
U2AF1-207ENST00000468039 MAP3K2Q9Y2U5 619 aa6.33□□□□□ -1.4
U2AF1-207ENST00000468039 COL11A2P13942 1736 aaPredicted RBP6.33□□□□□ -1.4
U2AF1-207ENST00000468039 ADCY9O60503 1353 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 ANKRD31Q8N7Z5 1873 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 NUP98P52948 1817 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 KIF13BQ9NQT8 1826 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 ARFGEF2Q9Y6D5 1785 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 NTSR2O95665 410 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 ACRP10323 421 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 NCLP19338 710 aaKnown RBP6.32□□□□□ -1.4
U2AF1-207ENST00000468039 TPP2P29144 1249 aaPredicted RBP6.32□□□□□ -1.4
U2AF1-207ENST00000468039 TGFB2P61812 414 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 HSP90AB3PQ58FF7 597 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 GIMAP6Q6P9H5 292 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 TMPRSS7Q7RTY8 843 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 TMEM192Q8IY95 271 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 CCDC144CPQ8IYA2 1237 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 PI4K2BQ8TCG2 481 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 SSH1Q8WYL5 1049 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 SHDQ96IW2 340 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 ZNF512BQ96KM6 892 aaPredicted RBP6.32□□□□□ -1.4
U2AF1-207ENST00000468039 ISCA1Q9BUE6 129 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 ATP13A1Q9HD20 1204 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 PAK6Q9NQU5 681 aaPredicted RBP6.32□□□□□ -1.4
U2AF1-207ENST00000468039 SEMA3GQ9NS98 782 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 FBXL21Q9UKT6 434 aa6.32□□□□□ -1.4
U2AF1-207ENST00000468039 ANKRD36CQ5JPF3 1778 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 PI4KAP2A4QPH2 592 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 H0YIN7 160 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 DDX58O95786 925 aaKnown RBP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 PMS1P54277 932 aaKnown RBP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 ZP2Q05996 745 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 PARP10Q53GL7 1025 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 TNNI3KQ59H18 835 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 DALRD3Q5D0E6 543 aaKnown RBP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 KSR2Q6VAB6 950 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 SPRED2Q7Z698 418 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 TTC6Q86TZ1 520 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 TRMT2AQ8IZ69 625 aaKnown RBP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 PI4KAP1Q8N8J0 262 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 ENOX1Q8TC92 643 aaKnown RBP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 ZNF622Q969S3 477 aaKnown RBP eCLIP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 VWCEQ96DN2 955 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 UTP14AQ9BVJ6 771 aaKnown RBP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 BRIP1Q9BX63 1249 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 NYXQ9GZU5 481 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 LMCD1Q9NZU5 365 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 TRMT112Q9UI30 125 aaKnown RBP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 R3HCC1Q9Y3T6 440 aaKnown RBP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 PCDHB12Q9Y5F1 795 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 MRVI1Q9Y6F6 885 aa6.31□□□□□ -1.4
U2AF1-207ENST00000468039 IBTKQ9P2D0 1353 aaPredicted RBP6.31□□□□□ -1.4
U2AF1-207ENST00000468039 ZBED9Q6R2W3 1325 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 IGKV5-2P06315 115 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 FUT4P22083 530 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 PDE6BP35913 854 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 CD96P40200 585 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 NMIQ13287 307 aaPredicted RBP6.3□□□□□ -1.4
U2AF1-207ENST00000468039 NBPF9Q3BBW0 867 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 OLFM4Q6UX06 510 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 DPH6Q7L8W6 267 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 PPP1R42Q7Z4L9 355 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 CREG2Q8IUH2 290 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 ANKRD13AQ8IZ07 590 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 FAM89AQ96GI7 184 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 YTHDC1Q96MU7 727 aaKnown RBP6.3□□□□□ -1.4
U2AF1-207ENST00000468039 DUSP15Q9H1R2 295 aaPredicted RBP6.3□□□□□ -1.4
U2AF1-207ENST00000468039 SMC4Q9NTJ3 1288 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 DUSP13Q9UII6 198 aa6.3□□□□□ -1.4
U2AF1-207ENST00000468039 SH3TC1Q8TE82 1336 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 A0A1W2PQH9 124 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 SSU72P8A0A1W2PR75 194 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 SRGNP10124 158 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 BRCA1P38398 1863 aaKnown RBP6.29□□□□□ -1.4
U2AF1-207ENST00000468039 CASP7P55210 303 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 ZYXQ15942 572 aaKnown RBP6.29□□□□□ -1.4
U2AF1-207ENST00000468039 GNPTABQ3T906 1256 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 TDRD10Q5VZ19 366 aaKnown RBP6.29□□□□□ -1.4
U2AF1-207ENST00000468039 SLC4A10Q6U841 1118 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 TSPYL5Q86VY4 417 aaPredicted RBP6.29□□□□□ -1.4
U2AF1-207ENST00000468039 TTLL6Q8N841 843 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 DNAAF4Q8WXU2 420 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 CCDC120Q96HB5 630 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 CARS2Q9HA77 564 aaKnown RBP6.29□□□□□ -1.4
U2AF1-207ENST00000468039 CWC25Q9NXE8 425 aaPredicted RBP6.29□□□□□ -1.4
U2AF1-207ENST00000468039 ZNF214Q9UL59 606 aaPredicted RBP6.29□□□□□ -1.4
U2AF1-207ENST00000468039 DLEC1Q9Y238 1755 aa6.29□□□□□ -1.4
U2AF1-207ENST00000468039 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
U2AF1-207ENST00000468039 IRS4O14654 1257 aaPredicted RBP6.28□□□□□ -1.4
U2AF1-207ENST00000468039 TP53P04637 393 aaPredicted RBP6.28□□□□□ -1.4
U2AF1-207ENST00000468039 FGRP09769 529 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 SRFP11831 508 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms