RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 BTN2A2Q8WVV5 523 aa6.74□□□□□ -1.33
XRN1-206ENST00000467077 CARD11Q9BXL7 1154 aa6.74□□□□□ -1.33
XRN1-206ENST00000467077 KATNBL1Q9H079 304 aa6.74□□□□□ -1.33
XRN1-206ENST00000467077 DMRT1Q9Y5R6 373 aa6.74□□□□□ -1.33
XRN1-206ENST00000467077 ZNF888P0CJ79 500 aaPredicted RBP6.73□□□□□ -1.33
XRN1-206ENST00000467077 HOXC12P31275 282 aa6.73□□□□□ -1.33
XRN1-206ENST00000467077 DNAJA1P31689 397 aaKnown RBP6.73□□□□□ -1.33
XRN1-206ENST00000467077 LTBRP36941 435 aa6.73□□□□□ -1.33
XRN1-206ENST00000467077 Q6ZSN1 163 aa6.73□□□□□ -1.33
XRN1-206ENST00000467077 STPG3Q8N7X2 389 aa6.73□□□□□ -1.33
XRN1-206ENST00000467077 LARP4BQ92615 738 aaKnown RBP6.73□□□□□ -1.33
XRN1-206ENST00000467077 MRGPRX3Q96LB0 322 aa6.73□□□□□ -1.33
XRN1-206ENST00000467077 AGAP2Q99490 1192 aa6.73□□□□□ -1.33
XRN1-206ENST00000467077 KCND1Q9NSA2 647 aa6.73□□□□□ -1.33
XRN1-206ENST00000467077 EFR3BQ9Y2G0 817 aa6.73□□□□□ -1.33
XRN1-206ENST00000467077 REXO2Q9Y3B8 237 aaKnown RBP6.73□□□□□ -1.33
XRN1-206ENST00000467077 PLSCR1O15162 318 aa6.72□□□□□ -1.33
XRN1-206ENST00000467077 GRIN1Q05586 938 aa6.72□□□□□ -1.33
XRN1-206ENST00000467077 ZMAT1Q5H9K5 638 aa6.72□□□□□ -1.33
XRN1-206ENST00000467077 SCUBE1Q8IWY4 988 aa6.72□□□□□ -1.33
XRN1-206ENST00000467077 DPYSL5Q9BPU6 564 aa6.72□□□□□ -1.33
XRN1-206ENST00000467077 AURKAIP1Q9NWT8 199 aaPredicted RBP6.72□□□□□ -1.33
XRN1-206ENST00000467077 PTPN22Q9Y2R2 807 aa6.72□□□□□ -1.33
XRN1-206ENST00000467077 CPP00450 1065 aa6.71□□□□□ -1.34
XRN1-206ENST00000467077 CKMP06732 381 aa6.71□□□□□ -1.34
XRN1-206ENST00000467077 KCNJ6P48051 423 aa6.71□□□□□ -1.34
XRN1-206ENST00000467077 SOX9P48436 509 aa6.71□□□□□ -1.34
XRN1-206ENST00000467077 CYP4F3Q08477 520 aa6.71□□□□□ -1.34
XRN1-206ENST00000467077 CCDC27Q2M243 656 aa6.71□□□□□ -1.34
XRN1-206ENST00000467077 MAMDC4Q6UXC1 1216 aa6.71□□□□□ -1.34
XRN1-206ENST00000467077 PRRX2Q99811 253 aa6.71□□□□□ -1.34
XRN1-206ENST00000467077 C12orf65Q9H3J6 166 aaKnown RBP6.71□□□□□ -1.34
XRN1-206ENST00000467077 CUTAO60888 179 aa6.7□□□□□ -1.34
XRN1-206ENST00000467077 ENO2P09104 434 aaPredicted RBP6.7□□□□□ -1.34
XRN1-206ENST00000467077 CSRP2Q16527 193 aa6.7□□□□□ -1.34
XRN1-206ENST00000467077 ZNF808Q8N4W9 903 aaPredicted RBP6.7□□□□□ -1.34
XRN1-206ENST00000467077 PLA2G12BQ9BX93 195 aa6.7□□□□□ -1.34
XRN1-206ENST00000467077 LGR4Q9BXB1 951 aa6.7□□□□□ -1.34
XRN1-206ENST00000467077 NR2E1Q9Y466 385 aa6.7□□□□□ -1.34
XRN1-206ENST00000467077 NUB1Q9Y5A7 615 aa6.7□□□□□ -1.34
XRN1-206ENST00000467077 SLC27A2O14975 620 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 ITGAVP06756 1048 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 HIBADHP31937 336 aaKnown RBP6.69□□□□□ -1.34
XRN1-206ENST00000467077 RPS19P39019 145 aaKnown RBP6.69□□□□□ -1.34
XRN1-206ENST00000467077 RRADP55042 308 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 NCAPHQ15003 741 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 TESK1Q15569 626 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 RNF151Q2KHN1 245 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 FNDC7Q5VTL7 733 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 CLIP3Q96DZ5 547 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 SLC6A20Q9NP91 592 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 METTL5Q9NRN9 209 aaKnown RBP6.69□□□□□ -1.34
XRN1-206ENST00000467077 LRP2BPQ9P2M1 347 aa6.69□□□□□ -1.34
XRN1-206ENST00000467077 SCG5P05408 212 aa6.68□□□□□ -1.34
XRN1-206ENST00000467077 LCP1P13796 627 aa6.68□□□□□ -1.34
XRN1-206ENST00000467077 POLD1P28340 1107 aa6.68□□□□□ -1.34
XRN1-206ENST00000467077 CASP7P55210 303 aa6.68□□□□□ -1.34
XRN1-206ENST00000467077 HHEXQ03014 270 aa6.68□□□□□ -1.34
XRN1-206ENST00000467077 PIP4K2CQ8TBX8 421 aa6.68□□□□□ -1.34
XRN1-206ENST00000467077 CCDC140Q96MF4 163 aa6.68□□□□□ -1.34
XRN1-206ENST00000467077 TACO1Q9BSH4 297 aaKnown RBP6.68□□□□□ -1.34
XRN1-206ENST00000467077 TLR9Q9NR96 1032 aa6.68□□□□□ -1.34
XRN1-206ENST00000467077 FAHP16930 419 aa6.67□□□□□ -1.34
XRN1-206ENST00000467077 ZC3H6P61129 1189 aaKnown RBP6.67□□□□□ -1.34
XRN1-206ENST00000467077 FANCCQ00597 558 aa6.67□□□□□ -1.34
XRN1-206ENST00000467077 PAK2Q13177 524 aa6.67□□□□□ -1.34
XRN1-206ENST00000467077 PRSS53Q2L4Q9 553 aa6.67□□□□□ -1.34
XRN1-206ENST00000467077 PAN2Q504Q3 1202 aaKnown RBP6.67□□□□□ -1.34
XRN1-206ENST00000467077 ZNF627Q7L945 461 aa6.67□□□□□ -1.34
XRN1-206ENST00000467077 KREMEN2Q8NCW0 462 aa6.67□□□□□ -1.34
XRN1-206ENST00000467077 CPLX3Q8WVH0 158 aa6.67□□□□□ -1.34
XRN1-206ENST00000467077 MSL2Q9HCI7 577 aa6.67□□□□□ -1.34
XRN1-206ENST00000467077 ARNTLO00327 626 aa6.66□□□□□ -1.34
XRN1-206ENST00000467077 PFKPQ01813 784 aa6.66□□□□□ -1.34
XRN1-206ENST00000467077 CD276Q5ZPR3 534 aa6.66□□□□□ -1.34
XRN1-206ENST00000467077 SCYL1Q96KG9 808 aa6.66□□□□□ -1.34
XRN1-206ENST00000467077 TTPALQ9BTX7 342 aa6.66□□□□□ -1.34
XRN1-206ENST00000467077 PARPBPQ9NWS1 579 aa6.66□□□□□ -1.34
XRN1-206ENST00000467077 PUF60Q9UHX1 559 aaKnown RBP6.66□□□□□ -1.34
XRN1-206ENST00000467077 TBX1O43435 398 aa6.65□□□□□ -1.34
XRN1-206ENST00000467077 BMP5P22003 454 aa6.65□□□□□ -1.34
XRN1-206ENST00000467077 MSX2P35548 267 aaPredicted RBP6.65□□□□□ -1.34
XRN1-206ENST00000467077 TUSC3Q13454 348 aa6.65□□□□□ -1.34
XRN1-206ENST00000467077 LRCH2Q5VUJ6 765 aa6.65□□□□□ -1.34
XRN1-206ENST00000467077 PCSK4Q6UW60 755 aa6.65□□□□□ -1.34
XRN1-206ENST00000467077 ZNF227Q86WZ6 799 aa6.65□□□□□ -1.34
XRN1-206ENST00000467077 CLEC4DQ8WXI8 215 aa6.65□□□□□ -1.34
XRN1-206ENST00000467077 ZNF703Q9H7S9 590 aaPredicted RBP6.65□□□□□ -1.34
XRN1-206ENST00000467077 DDX41Q9UJV9 622 aaKnown RBP6.65□□□□□ -1.34
XRN1-206ENST00000467077 GIT1Q9Y2X7 761 aa6.65□□□□□ -1.34
XRN1-206ENST00000467077 TMEM191CA6NGB0 347 aa6.64□□□□□ -1.35
XRN1-206ENST00000467077 ZNF839A8K0R7 811 aa6.64□□□□□ -1.35
XRN1-206ENST00000467077 RACK1P63244 317 aaKnown RBP6.64□□□□□ -1.35
XRN1-206ENST00000467077 DUSP8Q13202 625 aa6.64□□□□□ -1.35
XRN1-206ENST00000467077 SV2CQ496J9 727 aa6.64□□□□□ -1.35
XRN1-206ENST00000467077 ESYT3A0FGR9 886 aa6.63□□□□□ -1.35
XRN1-206ENST00000467077 CYP27B1O15528 508 aa6.63□□□□□ -1.35
XRN1-206ENST00000467077 IL18BPO95998 194 aa6.63□□□□□ -1.35
XRN1-206ENST00000467077 IL12RB1P42701 662 aa6.63□□□□□ -1.35
XRN1-206ENST00000467077 CRHR2Q13324 411 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms