RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 KCNC3Q14003 757 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 SMC1AQ14683 1233 aaKnown RBP6.62□□□□□ -1.35
CXXC4-202ENST00000466963 PPP2R5DQ14738 602 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 FAM9BQ8IZU0 186 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 TDRD5Q8NAT2 981 aaKnown RBP6.62□□□□□ -1.35
CXXC4-202ENST00000466963 KHSRPQ92945 711 aaKnown RBP eCLIP6.62□□□□□ -1.35
CXXC4-202ENST00000466963 SMARCAD1Q9H4L7 1026 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 TUT1Q9H6E5 874 aaKnown RBP6.62□□□□□ -1.35
CXXC4-202ENST00000466963 TLE6Q9H808 572 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 TLR9Q9NR96 1032 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 TRPV2Q9Y5S1 764 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 SMIM35A0A1B0GVV1 85 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 LCHNA4D1U4 455 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 PIK3CDO00329 1044 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 BCAR3O75815 825 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 NR3C2P08235 984 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 PDHBP11177 359 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 THPOP40225 353 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 CCDC184Q52MB2 194 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 C15orf39Q6ZRI6 1047 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 ITPRIPQ8IWB1 547 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 MYOCDQ8IZQ8 938 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 CRIPAKQ8N1N5 446 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 MRPS27Q92552 414 aaKnown RBP6.62□□□□□ -1.35
CXXC4-202ENST00000466963 GLG1Q92896 1179 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 RMDN3Q96TC7 470 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 NFASCO94856 1347 aa6.62□□□□□ -1.35
CXXC4-202ENST00000466963 MINDY4BA8MYZ0 360 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 hCG_1984214I3L0E3 225 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 GPR182O15218 404 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 LINC00271P0C7V0 271 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 TBC1D8BQ0IIM8 1120 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 PCBP1Q15365 356 aaKnown RBP eCLIP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 NIPA1Q7RTP0 329 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 PLPPR4Q7Z2D5 763 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 EXOC8Q8IYI6 725 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 ZNF713Q8N859 430 aaPredicted RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 VN1R2Q8NFZ6 395 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 NUP88Q99567 741 aaPredicted RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 C16orf70Q9BSU1 422 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 TRAIPQ9BWF2 469 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 KRT23Q9C075 422 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 TMEM117Q9H0C3 514 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 S1PR5Q9H228 398 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 ERAP1Q9NZ08 941 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 PCDHGA2Q9Y5H1 932 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 ATG2AQ2TAZ0 1938 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 SPATA31C2B4DYI2 1134 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 NOP56O00567 594 aaKnown RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 ENPP3O14638 875 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 PRKAB2O43741 272 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 SMIM10L2AP0DMW4 78 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 SMIM10L2BP0DMW5 78 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 GNAQP50148 359 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 MLLT6P55198 1093 aaPredicted RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 FAM189BP81408 668 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 MRPS6P82932 125 aaKnown RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 FAM177A1Q8N128 213 aaPredicted RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 DTWD2Q8NBA8 298 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 RUBCNQ92622 972 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 EVI5LQ96CN4 794 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 SPATA33Q96N06 139 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 INPP4AQ96PE3 977 aaPredicted RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 MLXIPQ9HAP2 919 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 CLEC1BQ9P126 229 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 LRFN2Q9ULH4 789 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 PCDHA2Q9Y5H9 948 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 PIEZO1Q92508 2521 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 RAD21O60216 631 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 TBX10O75333 385 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 EOMESO95936 686 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 MCCP23508 829 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 CALML3P27482 149 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 CNR2P34972 360 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 NRLP54845 237 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 PUS7LQ9H0K6 701 aaKnown RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 HOMER2Q9NSB8 354 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 ZBTB40Q9NUA8 1239 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 TMEM161AQ9NX61 479 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 DUSP12Q9UNI6 340 aa6.61□□□□□ -1.35
CXXC4-202ENST00000466963 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.61□□□□□ -1.35
CXXC4-202ENST00000466963 GCOM1H8Y6P7 765 aaPredicted RBP6.6□□□□□ -1.35
CXXC4-202ENST00000466963 LGALS2P05162 132 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 POLR2MP0CAP2 368 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 SCG2P13521 617 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 LIMK1P53667 647 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 PRKCQQ04759 706 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 FBXO47Q5MNV8 452 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 PCNX4Q63HM2 1172 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 CUL5Q93034 780 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 PDCD2LQ9BRP1 358 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 SFXN1Q9H9B4 322 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 CYP26B1Q9NR63 512 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 STX8Q9UNK0 236 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 ARHGEF15O94989 841 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 ZNF484Q5JVG2 852 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 ATAT1Q5SQI0 421 aa6.6□□□□□ -1.35
CXXC4-202ENST00000466963 SLC30A10Q6XR72 485 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms