RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 PHF20L1A8MW92 1017 aa20.27■□□□□ 0.84
LETM1-202ENST00000466175 CTNND1O60716 968 aaKnown RBP20.27■□□□□ 0.84
LETM1-202ENST00000466175 URI1O94763 535 aaPredicted RBP20.27■□□□□ 0.84
LETM1-202ENST00000466175 ICAM1P05362 532 aa20.27■□□□□ 0.84
LETM1-202ENST00000466175 PPP2R5CQ13362 524 aa20.27■□□□□ 0.84
LETM1-202ENST00000466175 ARHGAP29Q52LW3 1261 aa20.27■□□□□ 0.84
LETM1-202ENST00000466175 HERC4Q5GLZ8 1057 aaPredicted RBP20.27■□□□□ 0.84
LETM1-202ENST00000466175 CCDC170Q8IYT3 715 aa20.27■□□□□ 0.84
LETM1-202ENST00000466175 SLC5A5Q92911 643 aa20.27■□□□□ 0.84
LETM1-202ENST00000466175 FEZ1Q99689 392 aa20.27■□□□□ 0.84
LETM1-202ENST00000466175 WDR11Q9BZH6 1224 aa20.27■□□□□ 0.84
LETM1-202ENST00000466175 KIAA1683Q9H0B3 1180 aa20.27■□□□□ 0.84
LETM1-202ENST00000466175 MRPL44Q9H9J2 332 aaKnown RBP20.27■□□□□ 0.84
LETM1-202ENST00000466175 MAP3K20Q9NYL2 800 aaKnown RBP20.27■□□□□ 0.84
LETM1-202ENST00000466175 EPN1Q9Y6I3 576 aaPredicted RBP20.27■□□□□ 0.84
LETM1-202ENST00000466175 POTEFA5A3E0 1075 aa20.27■□□□□ 0.83
LETM1-202ENST00000466175 RNF225M0QZC1 329 aaPredicted RBP20.27■□□□□ 0.83
LETM1-202ENST00000466175 EYA4O95677 639 aa20.27■□□□□ 0.83
LETM1-202ENST00000466175 HSPA6P17066 643 aa20.27■□□□□ 0.83
LETM1-202ENST00000466175 EDRF1Q3B7T1 1238 aa20.27■□□□□ 0.83
LETM1-202ENST00000466175 POTEGQ6S5H5 508 aa20.27■□□□□ 0.83
LETM1-202ENST00000466175 POTEEQ6S8J3 1075 aa20.27■□□□□ 0.83
LETM1-202ENST00000466175 MCF2L2Q86YR7 1114 aa20.27■□□□□ 0.83
LETM1-202ENST00000466175 PRPF38AQ8NAV1 312 aaKnown RBP20.27■□□□□ 0.83
LETM1-202ENST00000466175 HOOK2Q96ED9 719 aa20.27■□□□□ 0.83
LETM1-202ENST00000466175 PCMTD1Q96MG8 357 aaPredicted RBP20.27■□□□□ 0.83
LETM1-202ENST00000466175 COL4A3BPQ9Y5P4 624 aa20.27■□□□□ 0.83
LETM1-202ENST00000466175 PASKQ96RG2 1323 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 CEP350Q5VT06 3117 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 NDUFA10O95299 355 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 FDX1P10109 184 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 CYLC1P35663 651 aaPredicted RBP20.26■□□□□ 0.83
LETM1-202ENST00000466175 MARSP56192 900 aaKnown RBP20.26■□□□□ 0.83
LETM1-202ENST00000466175 KRT83P78385 493 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 GHRHRQ02643 423 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 CEP55Q53EZ4 464 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 PRAMEF18Q5VWM3 479 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 ZNF662Q6ZS27 426 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 SULF1Q8IWU6 871 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 EIF2AK1Q9BQI3 630 aaKnown RBP20.26■□□□□ 0.83
LETM1-202ENST00000466175 ZNF341Q9BYN7 854 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 ZNF408Q9H9D4 720 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 EMILIN3Q9NT22 766 aa20.26■□□□□ 0.83
LETM1-202ENST00000466175 PSMD10O75832 226 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 GAP43P17677 238 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 HSD17B4P51659 736 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 ARSHQ5FYA8 562 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 LRCH2Q5VUJ6 765 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 OTOP1Q7RTM1 612 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 CDAN1Q8IWY9 1227 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 ZC3H3Q8IXZ2 948 aaKnown RBP20.25■□□□□ 0.83
LETM1-202ENST00000466175 MNS1Q8NEH6 495 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 TEPSINQ96N21 525 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 SLF1Q9BQI6 1058 aa20.25■□□□□ 0.83
LETM1-202ENST00000466175 HNRNPH3P31942 346 aaKnown RBP20.24■□□□□ 0.83
LETM1-202ENST00000466175 GIT2Q14161 759 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 LRRC41Q15345 812 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 ZYXQ15942 572 aaKnown RBP20.24■□□□□ 0.83
LETM1-202ENST00000466175 NIPA1Q7RTP0 329 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 WDR24Q96S15 920 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 TRPM7Q96QT4 1865 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 IPO7O95373 1038 aaKnown RBP20.24■□□□□ 0.83
LETM1-202ENST00000466175 APLP1P51693 650 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 USP14P54578 494 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 DCAF15Q66K64 600 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 NEK9Q8TD19 979 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 HSD17B14Q9BPX1 270 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 WDR18Q9BV38 432 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 LZTFL1Q9NQ48 299 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 KCND2Q9NZV8 630 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 FAM184BQ9ULE4 1060 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 CCPG1Q9ULG6 757 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 SIK3Q9Y2K2 1263 aa20.24■□□□□ 0.83
LETM1-202ENST00000466175 EFCAB8A8MWE9 144 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 MEIS1O00470 390 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 BCRP11274 1271 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 TUBB4BP68371 445 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 PABPC4Q13310 644 aaKnown RBP eCLIP20.23■□□□□ 0.83
LETM1-202ENST00000466175 CCDC40Q4G0X9 1142 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 WDR59Q6PJI9 974 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 SCFD1Q8WVM8 642 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 RIT2Q99578 217 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 NUCKS1Q9H1E3 243 aaKnown RBP20.23■□□□□ 0.83
LETM1-202ENST00000466175 KCTD10Q9H3F6 313 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 HAUS4Q9H6D7 363 aa20.23■□□□□ 0.83
LETM1-202ENST00000466175 LOXHD1Q8IVV2 1947 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 RASSF10A6NK89 507 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 GAS7O60861 476 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 TBCAO75347 108 aaKnown RBP20.22■□□□□ 0.83
LETM1-202ENST00000466175 PPP2R3AQ06190 1150 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 ACRBPQ8NEB7 543 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 CYP2W1Q8TAV3 490 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 CHP1Q99653 195 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 TRAF3IP3Q9Y228 551 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 MRFAP1Q9Y605 127 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 RPTORQ8N122 1335 aa20.22■□□□□ 0.83
LETM1-202ENST00000466175 NPHP3-ACAD11A0A0J9YXS1 232 aa20.21■□□□□ 0.83
LETM1-202ENST00000466175 EIF3CLB5ME19 914 aaKnown RBP20.21■□□□□ 0.83
LETM1-202ENST00000466175 CETN3O15182 167 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms