RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 B4GALT4O60513 344 aa18.88■□□□□ 0.61
HLA-DPA1-245ENST00000463066 CCNT1O60563 726 aaKnown RBP18.88■□□□□ 0.61
HLA-DPA1-245ENST00000463066 ITGB8P26012 769 aa18.88■□□□□ 0.61
HLA-DPA1-245ENST00000463066 MOXD1Q6UVY6 613 aa18.88■□□□□ 0.61
HLA-DPA1-245ENST00000463066 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
HLA-DPA1-245ENST00000463066 ETNPPLQ8TBG4 499 aa18.88■□□□□ 0.61
HLA-DPA1-245ENST00000463066 SCN10AQ9Y5Y9 1956 aa18.88■□□□□ 0.61
HLA-DPA1-245ENST00000463066 CEP290O15078 2479 aa18.88■□□□□ 0.61
HLA-DPA1-245ENST00000463066 DCDC2CA8MYV0 355 aa18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 H3BRB1 525 aa18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 CD4P01730 458 aa18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 CLTBP09497 229 aa18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 CYP2C9P11712 490 aa18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 MARK3P27448 753 aa18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 ZNF200P98182 395 aaPredicted RBP18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 GDF6Q6KF10 455 aaPredicted RBP18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 TOX2Q96NM4 488 aa18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 CTAGE1Q96RT6 745 aa18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 FOXP1Q9H334 677 aaPredicted RBP18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 UNC45AQ9H3U1 944 aa18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 TUT1Q9H6E5 874 aaKnown RBP18.87■□□□□ 0.61
HLA-DPA1-245ENST00000463066 UMODL1Q5DID0 1318 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 CHMP2AO43633 222 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 NBR1Q14596 966 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 LRCH2Q5VUJ6 765 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 LARP1BQ659C4 914 aaKnown RBP18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 MCTP1Q6DN14 999 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 PPP4R3AQ6IN85 833 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 NFRKBQ6P4R8 1299 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 ABHD15Q6UXT9 468 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 NOSTRINQ8IVI9 506 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 HSCBQ8IWL3 235 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 HAS1Q92839 578 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 RNPEPQ9H4A4 650 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 TBC1D22BQ9NU19 505 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 TMEM39AQ9NV64 488 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 TBX21Q9UL17 535 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 KIF3AQ9Y496 699 aa18.86■□□□□ 0.61
HLA-DPA1-245ENST00000463066 GAS7O60861 476 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 LGR5O75473 907 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 PSMD10O75832 226 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 ATG7O95352 703 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 SUPT20HL2P0C7V6 817 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 SMIM10L2AP0DMW4 78 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 SMIM10L2BP0DMW5 78 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 GCFC2P16383 781 aaKnown RBP18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 GNL2Q13823 731 aaKnown RBP18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 CCDC60Q8IWA6 550 aaPredicted RBP18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 C7orf31Q8N865 590 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 GLG1Q92896 1179 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 TEKT3Q9BXF9 490 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 PPP1R12CQ9BZL4 782 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 TMEM60Q9H2L4 133 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 KCNMB3Q9NPA1 279 aa18.85■□□□□ 0.61
HLA-DPA1-245ENST00000463066 MROH7Q68CQ1 1323 aa18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 H3BQV1 296 aa18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 KIAA0355O15063 1070 aa18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 TLR3O15455 904 aaKnown RBP18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 U2AF2P26368 475 aaKnown RBP eCLIP18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 MDM2Q00987 491 aaPredicted RBP18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 ZNF174Q15697 407 aa18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 PRPF38BQ5VTL8 546 aaKnown RBP18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 SPRYD3Q8NCJ5 442 aa18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 RIT2Q99578 217 aa18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 KATNAL1Q9BW62 490 aa18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 GTF2IRD1Q9UHL9 959 aa18.84■□□□□ 0.61
HLA-DPA1-245ENST00000463066 EMSYQ7Z589 1322 aa18.83■□□□□ 0.61
HLA-DPA1-245ENST00000463066 IGKV6D-21A0A0A0MT36 114 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 BACH1O14867 736 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 CYP2C18P33260 490 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 MCM7P33993 719 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 MAGEA10P43363 369 aaPredicted RBP18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TOB1P50616 345 aaPredicted RBP18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 KRT76Q01546 638 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 ZNF746Q6NUN9 644 aaPredicted RBP18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SWSAP1Q6NVH7 229 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 B3GNT9Q6UX72 402 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SESTD1Q86VW0 696 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 DHX38Q92620 1227 aaKnown RBP18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 WNT8BQ93098 351 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 ZBTB10Q96DT7 871 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 INTS4Q96HW7 963 aaKnown RBP18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SMARCAD1Q9H4L7 1026 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SETD4Q9NVD3 440 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 VAV3Q9UKW4 847 aa18.83■□□□□ 0.6
HLA-DPA1-245ENST00000463066 VPS37CA5D8V6 355 aaPredicted RBP18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 EML1O00423 815 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 ATP4AP20648 1035 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 STAT5BP51692 787 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PTPN11Q06124 597 aaPredicted RBP18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PLCB4Q15147 1175 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PTGISQ16647 500 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 UGCGQ16739 394 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TTC38Q5R3I4 469 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 MIS18BP1Q6P0N0 1132 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 BADQ92934 168 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 NAP1L4Q99733 375 aaKnown RBP18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 NOC4LQ9BVI4 516 aaKnown RBP18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 DISC1Q9NRI5 854 aa18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PRKAG2Q9UGJ0 569 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms