RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TEKQ02763 1124 aa9.13□□□□□ -0.95
UBE4B-204ENST00000462658 SERINC3Q13530 473 aa9.13□□□□□ -0.95
UBE4B-204ENST00000462658 SV2CQ496J9 727 aa9.13□□□□□ -0.95
UBE4B-204ENST00000462658 ZPBP2Q6X784 338 aa9.13□□□□□ -0.95
UBE4B-204ENST00000462658 NBPF11Q86T75 865 aa9.13□□□□□ -0.95
UBE4B-204ENST00000462658 AGBL5Q8NDL9 886 aa9.13□□□□□ -0.95
UBE4B-204ENST00000462658 SYTL4Q96C24 671 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-204ENST00000462658 CHMP4BQ9H444 224 aaKnown RBP9.13□□□□□ -0.95
UBE4B-204ENST00000462658 MBNL3Q9NUK0 354 aaKnown RBP9.13□□□□□ -0.95
UBE4B-204ENST00000462658 SLAMF8Q9P0V8 285 aa9.13□□□□□ -0.95
UBE4B-204ENST00000462658 USP16Q9Y5T5 823 aa9.13□□□□□ -0.95
UBE4B-204ENST00000462658 DNAJC25-GNG10A0A024R161 153 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 SSU72P8A0A1W2PR75 194 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 ANXA1P04083 346 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 GSNP06396 782 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 RNASE1P07998 156 aaKnown RBP9.12□□□□□ -0.95
UBE4B-204ENST00000462658 PCBP3P57721 371 aaKnown RBP9.12□□□□□ -0.95
UBE4B-204ENST00000462658 RALGPS1Q5JS13 557 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 EEPD1Q7L9B9 569 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 DDX21Q9NR30 783 aaKnown RBP eCLIP9.12□□□□□ -0.95
UBE4B-204ENST00000462658 HYPKQ9NX55 129 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 SIRPGQ9P1W8 387 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 CGGBP1Q9UFW8 167 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-204ENST00000462658 ASAP1Q9ULH1 1129 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 AKT3Q9Y243 479 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 BCL9O00512 1426 aa9.12□□□□□ -0.95
UBE4B-204ENST00000462658 A0A087WZG4 1122 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 CCT4P50991 539 aaKnown RBP9.11□□□□□ -0.95
UBE4B-204ENST00000462658 ZNF143P52747 638 aaPredicted RBP9.11□□□□□ -0.95
UBE4B-204ENST00000462658 PROSER3Q2NL68 480 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 ZNF792Q3KQV3 632 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 SLC23A3Q6PIS1 610 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 SLC4A10Q6U841 1118 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 LINC00116Q8NCU8 138 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 LRRN4CLQ8ND94 238 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 ADAMTS10Q9H324 1103 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 ZBTB40Q9NUA8 1239 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 DIS3Q9Y2L1 958 aaKnown RBP9.11□□□□□ -0.95
UBE4B-204ENST00000462658 SF3B6Q9Y3B4 125 aaKnown RBP9.11□□□□□ -0.95
UBE4B-204ENST00000462658 MSRB2Q9Y3D2 182 aa9.11□□□□□ -0.95
UBE4B-204ENST00000462658 NAT2P11245 290 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 MYL6BP14649 208 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 VAV1P15498 845 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 RPL10P27635 214 aaKnown RBP9.1□□□□□ -0.95
UBE4B-204ENST00000462658 BMP8BP34820 402 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 DPY19L1Q2PZI1 675 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 SLC10A6Q3KNW5 377 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 SOGA3Q5TF21 947 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 CWF19L1Q69YN2 538 aaKnown RBP9.1□□□□□ -0.95
UBE4B-204ENST00000462658 RNF111Q6ZNA4 994 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 CENPQQ7L2Z9 268 aaPredicted RBP9.1□□□□□ -0.95
UBE4B-204ENST00000462658 ARHGEF39Q8N4T4 335 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 ALPK1Q96QP1 1244 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 TEX13AQ9BXU3 409 aaPredicted RBP9.1□□□□□ -0.95
UBE4B-204ENST00000462658 LNPKQ9C0E8 428 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 TOGARAM1Q9Y4F4 1720 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 NHSQ6T4R5 1651 aa9.1□□□□□ -0.95
UBE4B-204ENST00000462658 TMEM82A0PJX8 343 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 PI4KAP2A4QPH2 592 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 FAM221BA6H8Z2 402 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 TBX1O43435 398 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 ZNF205O95201 554 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 KCNH1O95259 989 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 DDX58O95786 925 aaKnown RBP9.09□□□□□ -0.95
UBE4B-204ENST00000462658 IGHDP01880 384 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 CD3EP07766 207 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 AIMP1Q12904 312 aaKnown RBP9.09□□□□□ -0.95
UBE4B-204ENST00000462658 KSR2Q6VAB6 950 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 PI4KAP1Q8N8J0 262 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 BVESQ8NE79 360 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 DNAAF4Q8WXU2 420 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 RCC1LQ96I51 464 aaKnown RBP9.09□□□□□ -0.95
UBE4B-204ENST00000462658 CAMKK2Q96RR4 588 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 MCMBPQ9BTE3 642 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 SLC12A9Q9BXP2 914 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 RWDD1Q9H446 243 aaPredicted RBP9.09□□□□□ -0.95
UBE4B-204ENST00000462658 LRP2BPQ9P2M1 347 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 KCPQ6ZWJ8 1503 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 RGPD3A6NKT7 1758 aaPredicted RBP9.09□□□□□ -0.95
UBE4B-204ENST00000462658 RGPD4Q7Z3J3 1758 aa9.09□□□□□ -0.95
UBE4B-204ENST00000462658 KDM2BQ8NHM5 1336 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 BTAF1O14981 1849 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 PDPK1O15530 556 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 A1BGP04217 495 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 ITGAVP06756 1048 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 IFNGR1P15260 489 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 PIP4K2AP48426 406 aaPredicted RBP9.08□□□□□ -0.96
UBE4B-204ENST00000462658 EZH2Q15910 746 aaKnown RBP9.08□□□□□ -0.96
UBE4B-204ENST00000462658 RTP2Q5QGT7 225 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 COPS6Q7L5N1 327 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 DNAJC10Q8IXB1 793 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 FCRL3Q96P31 734 aaPredicted RBP9.08□□□□□ -0.96
UBE4B-204ENST00000462658 OSBPL2Q9H1P3 480 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 RC3H2Q9HBD1 1191 aaKnown RBP9.08□□□□□ -0.96
UBE4B-204ENST00000462658 AP5S1Q9NUS5 200 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 EBF1Q9UH73 591 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 EMC9Q9Y3B6 208 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 DOT1LQ8TEK3 1739 aa9.08□□□□□ -0.96
UBE4B-204ENST00000462658 PAPPAQ13219 1627 aa9.07□□□□□ -0.96
UBE4B-204ENST00000462658 NOP56O00567 594 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms