RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TRIML2Q8N7C3 387 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 NEK9Q8TD19 979 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 IWS1Q96ST2 819 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 MID2Q9UJV3 735 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 STX8Q9UNK0 236 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 ORC6Q9Y5N6 252 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 ZNF609O15014 1411 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 NEK2P51955 445 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 SMTNP53814 917 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 YWHAEP62258 255 aaKnown RBP10.58□□□□□ -0.72
UFD1-205ENST00000459854 DCAF15Q66K64 600 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 CLEC17AQ6ZS10 378 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 PDZD8Q8NEN9 1154 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 LZICQ8WZA0 190 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 DESI2Q9BSY9 194 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 TRIM15Q9C019 465 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 ZNF831Q5JPB2 1677 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 GPAA1O43292 621 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 VSTM4Q8IW00 320 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 ABCB6Q9NP58 842 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 ITGB1BP2Q9UKP3 347 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 NDUFB9Q9Y6M9 179 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 YIPF3Q9GZM5 350 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 ARMT1Q9H993 441 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 BAG5Q9UL15 447 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 LOC102724159A0A0B4J2E5 919 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 TARSL2A2RTX5 802 aaKnown RBP10.57□□□□□ -0.72
UFD1-205ENST00000459854 PSMD14O00487 310 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 TADA3O75528 432 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 CRKP46108 304 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 PWP2Q15269 919 aaKnown RBP10.57□□□□□ -0.72
UFD1-205ENST00000459854 CATSPER1Q8NEC5 780 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 HGSO14964 777 aaPredicted RBP10.57□□□□□ -0.72
UFD1-205ENST00000459854 PPP1R12AO14974 1030 aaPredicted RBP10.57□□□□□ -0.72
UFD1-205ENST00000459854 KCNA4P22459 653 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 CRYMQ14894 314 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 RPS6KA2Q15349 733 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 SUPT20HL1Q3ZLR7 823 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 GALNT17Q6IS24 598 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 CDKL2Q92772 493 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 SLC24A3Q9HC58 644 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 CNOT7Q9UIV1 285 aaKnown RBP10.57□□□□□ -0.72
UFD1-205ENST00000459854 ARFGEF2Q9Y6D5 1785 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 PRPF6O94906 941 aaKnown RBP10.57□□□□□ -0.72
UFD1-205ENST00000459854 KRT5P13647 590 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 IL1R1P14778 569 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 COPB1P53618 953 aaKnown RBP10.57□□□□□ -0.72
UFD1-205ENST00000459854 SLC12A2P55011 1212 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 FNBP1Q96RU3 617 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 RAB20Q9NX57 234 aa10.57□□□□□ -0.72
UFD1-205ENST00000459854 AFDNP55196 1824 aaKnown RBP10.57□□□□□ -0.72
UFD1-205ENST00000459854 IPO5O00410 1097 aaKnown RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 ESRRBO95718 433 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 MECOMQ03112 1051 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 FAM133BQ5BKY9 247 aaKnown RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 ENOX1Q8TC92 643 aaKnown RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 BPIFA3Q9BQP9 254 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 FANCLQ9NW38 375 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 GMNCA6NCL1 334 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 SLC8A3P57103 927 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 PNOCQ13519 176 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 KCTD16Q68DU8 428 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 APOBEC3FQ8IUX4 373 aaKnown RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 MICALL2Q8IY33 904 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 SRRM1Q8IYB3 904 aaKnown RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 CCDC138Q96M89 665 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 GPBP1L1Q9HC44 474 aaPredicted RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 SERTAD1Q9UHV2 236 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 MX2P20592 715 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 ADD2P35612 726 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 GMPSP49915 693 aaPredicted RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 HDLBPQ00341 1268 aaKnown RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 PI16Q6UXB8 463 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 GPC2Q8N158 579 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 TGFBRAP1Q8WUH2 860 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 RSAD2Q8WXG1 361 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 EDC3Q96F86 508 aaKnown RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 FAM81BQ96LP2 452 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 EPB41L5Q9HCM4 733 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 TPCN1Q9ULQ1 816 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 MYH14Q7Z406 1995 aaKnown RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 ESRRAP11474 423 aaPredicted RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 GFAPP14136 432 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 KIF11P52732 1056 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 HDAC4P56524 1084 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 NONOQ15233 471 aaKnown RBP eCLIP10.56□□□□□ -0.72
UFD1-205ENST00000459854 C16orf87Q6PH81 154 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 LRRC43Q8N309 656 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 RTFDC1Q9BY42 306 aaPredicted RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 POLR3EQ9NVU0 708 aa10.56□□□□□ -0.72
UFD1-205ENST00000459854 ARPP21Q9UBL0 812 aaPredicted RBP10.56□□□□□ -0.72
UFD1-205ENST00000459854 PDS5AQ29RF7 1337 aaKnown RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 E9PMD0 336 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 HNRNPCP07910 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
UFD1-205ENST00000459854 MRPS35P82673 323 aaKnown RBP10.55□□□□□ -0.72
UFD1-205ENST00000459854 ATG16L1Q676U5 607 aa10.55□□□□□ -0.72
UFD1-205ENST00000459854 PRPF31Q8WWY3 499 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms