RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	BRDT	Q58F21	947 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	UTP14C	Q5TAP6	766 aa	Known RBP	11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	PRPF38B	Q5VTL8	546 aa	Known RBP	11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	PPP4R3A	Q6IN85	833 aa		11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	POTED	Q86YR6	584 aa		11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	FOXP1	Q9H334	677 aa	Predicted RBP	11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	BRMS1	Q9HCU9	246 aa		11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	TRMT13	Q9NUP7	481 aa	Known RBP	11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	DDX25	Q9UHL0	483 aa	Known RBP	11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	TBX21	Q9UL17	535 aa		11.64	□□□□□ -0.55
MRPL55-223	ENST00000459783	UMODL1	Q5DID0	1318 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	NOP56	O00567	594 aa	Known RBP	11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	HOXC8	P31273	242 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	CHMP4BP1	P59074	171 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	ZNF200	P98182	395 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	KIAA0753	Q2KHM9	967 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	GDF6	Q6KF10	455 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	ABHD15	Q6UXT9	468 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	NOSTRIN	Q8IVI9	506 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	SEPT1	Q8WYJ6	367 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	WNT8B	Q93098	351 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	INTS4	Q96HW7	963 aa	Known RBP	11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	TOX2	Q96NM4	488 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	SDF4	Q9BRK5	362 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	TMEM60	Q9H2L4	133 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	UNC45A	Q9H3U1	944 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	RNPEP	Q9H4A4	650 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	HDAC6	Q9UBN7	1215 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	VAV3	Q9UKW4	847 aa		11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL55-223	ENST00000459783	EMSY	Q7Z589	1322 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783		H3BRB1	525 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	CCNT1	O60563	726 aa	Known RBP	11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	CLTB	P09497	229 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	SUPT20HL2	P0C7V6	817 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	GCFC2	P16383	781 aa	Known RBP	11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	ATP4A	P20648	1035 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	SPIRE1	Q08AE8	756 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	SAFB	Q15424	915 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	UGCG	Q16739	394 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	NFRKB	Q6P4R8	1299 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	SESTD1	Q86VW0	696 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	DHX38	Q92620	1227 aa	Known RBP	11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	RIT2	Q99578	217 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	TUT1	Q9H6E5	874 aa	Known RBP	11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	TBC1D22B	Q9NU19	505 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	GTF2IRD1	Q9UHL9	959 aa		11.62	□□□□□ -0.55
MRPL55-223	ENST00000459783	LTBP2	Q14767	1821 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	EML1	O00423	815 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	KIAA0355	O15063	1070 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	SMIM10L2A	P0DMW4	78 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	SMIM10L2B	P0DMW5	78 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	CYP2C9	P11712	490 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	ATP2B1	P20020	1258 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	MARK3	P27448	753 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	ADAM17	P78536	824 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	FAM47C	Q5HY64	1035 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	LRCH2	Q5VUJ6	765 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	LARP1B	Q659C4	914 aa	Known RBP	11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	C4orf32	Q8N8J7	132 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	VWCE	Q96DN2	955 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	ZBTB10	Q96DT7	871 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	MTMR9	Q96QG7	549 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	NOC4L	Q9BVI4	516 aa	Known RBP	11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	PRO3102	Q9H379	93 aa		11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPL55-223	ENST00000459783	DCDC2C	A8MYV0	355 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	CHMP2A	O43633	222 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	ZNF862	O60290	1169 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	GAS7	O60861	476 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	STBD1	O95210	358 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	SYT1	P21579	422 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	MCM7	P33993	719 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	MAGEA10	P43363	369 aa	Predicted RBP	11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	EPHB4	P54760	987 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	KRT76	Q01546	638 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	PTPN11	Q06124	597 aa	Predicted RBP	11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	PLCB4	Q15147	1175 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	ZNF174	Q15697	407 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	TRIM71	Q2Q1W2	868 aa	Known RBP	11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	TTC38	Q5R3I4	469 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	SWSAP1	Q6NVH7	229 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	FERMT3	Q86UX7	667 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	HSCB	Q8IWL3	235 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	AFAP1L1	Q8TED9	768 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	LMBR1	Q8WVP7	490 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	GDF15	Q99988	308 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	TEKT3	Q9BXF9	490 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	WNT8A	Q9H1J5	351 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	SETD4	Q9NVD3	440 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	MTMR6	Q9Y217	621 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	KIF3A	Q9Y496	699 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	PCDHB6	Q9Y5E3	794 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	NR2E3	Q9Y5X4	410 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	MROH7	Q68CQ1	1323 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	IGSF9B	Q9UPX0	1349 aa		11.6	□□□□□ -0.55
MRPL55-223	ENST00000459783	ZBTB42	B2RXF5	422 aa		11.59	□□□□□ -0.55

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