RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 NELFCDQ8IXH7 590 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 KCTD17Q8N5Z5 321 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP38Q8NB14 1042 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 SMCR8Q8TEV9 937 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 IPO4Q8TEX9 1081 aaKnown RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 DCAF4Q8WV16 495 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 BAP1Q92560 729 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 TBC1D5Q92609 795 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 P3H4Q92791 437 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 CEP95Q96GE4 821 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZFP91Q96JP5 570 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 ATP6V1G3Q96LB4 118 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 GDAP1L1Q96MZ0 367 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZIM3Q96PE6 472 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 PNMA5Q96PV4 448 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 PSMB7Q99436 277 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 KRT12Q99456 494 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 MMTAG2Q9BU76 263 aaKnown RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 TLR10Q9BXR5 811 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 RTFDC1Q9BY42 306 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 RAB17Q9H0T7 212 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 ISCUQ9H1K1 167 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 EPN3Q9H201 632 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 TAOK3Q9H2K8 898 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZHX3Q9H4I2 956 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 TAF1DQ9H5J8 278 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLITRK6Q9H5Y7 841 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 PSTPIP2Q9H939 334 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 CNOT10Q9H9A5 744 aaKnown RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 ACTR5Q9H9F9 607 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 EPB41L5Q9HCM4 733 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 GPCPD1Q9NPB8 672 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM114A2Q9NRY5 505 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 EMILIN3Q9NT22 766 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 RBM12Q9NTZ6 932 aaKnown RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 TMEM260Q9NX78 707 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 MTMR4Q9NYA4 1195 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 AIPL1Q9NZN9 384 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 ARMCX3Q9UH62 379 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 LCMT1Q9UIC8 334 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 GGA2Q9UJY4 613 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCNL1Q9UK58 526 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 HDAC9Q9UKV0 1011 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 INTUQ9ULD6 942 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 NFU1Q9UMS0 254 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 PCDHA12Q9UN75 941 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 DNM3Q9UQ16 869 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 JAG2Q9Y219 1238 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 SUGT1Q9Y2Z0 365 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 UTP11Q9Y3A2 253 aaKnown RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 PCDHGC5Q9Y5F6 944 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 DUSP10Q9Y6W6 482 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 STRCQ7RTU9 1775 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 UBE4BO95155 1302 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 FRMPD2Q68DX3 1309 aaPredicted RBP3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 SBF2Q86WG5 1849 aa3.65□□□□□ -1.83
HMGN1P18-201ENST00000457642 DDX60LQ5H9U9 1706 aaKnown RBP3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 RASSF10A6NK89 507 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 SPDYE3A6NKU9 549 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 G3V3G9 751 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 AGPSO00116 658 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 KRIT1O00522 736 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 MPHOSPH10O00566 681 aaKnown RBP3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 PDXKO00764 312 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZNF263O14978 683 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZBTB5O15062 677 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 ADAMTS3O15072 1205 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 EPHB6O15197 1021 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 MEFVO15553 781 aaPredicted RBP3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 SART1O43290 800 aaKnown RBP3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC37A4O43826 429 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 PPP1R37O75864 691 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 BBOX1O75936 387 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM13AO94988 1023 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 KIF4AO95239 1232 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 MYBL2P10244 700 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 IL1R1P14778 569 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 VEGFAP15692 232 aaPredicted RBP3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 ADRA2BP18089 450 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 RFX1P22670 979 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 NR2F2P24468 414 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 CXCR5P32302 372 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 CTNNA1P35221 906 aaKnown RBP3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZNF76P36508 570 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 LIG3P49916 1009 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 USP11P51784 963 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 GUCY2FP51841 1108 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 MNAT1P51948 309 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 ATP2B2Q01814 1243 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 ARID5AQ03989 594 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 EHHADHQ08426 723 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZNF543Q08ER8 600 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 CETN1Q12798 172 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 KCNH2Q12809 1159 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 PDCLQ13371 301 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 LRRC41Q15345 812 aa3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 EZH2Q15910 746 aaKnown RBP3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 ENOX2Q16206 610 aaKnown RBP3.64□□□□□ -1.83
HMGN1P18-201ENST00000457642 PTGISQ16647 500 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms