RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 CCDC155Q8N6L0 562 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 GDAP1L1Q96MZ0 367 aa10.56□□□□□ -0.72
LINC01940-201ENST00000455228 TRMT112Q9UI30 125 aaKnown RBP10.56□□□□□ -0.72
LINC01940-201ENST00000455228 ITIH6Q6UXX5 1313 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 HTR3EA5X5Y0 456 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 KCNJ18B7U540 433 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 ATF3P18847 181 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 ARPC4P59998 168 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 CYP4A11Q02928 519 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 KCNJ12Q14500 433 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 CCDC122Q5T0U0 273 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 DEPTORQ8TB45 409 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 USP33Q8TEY7 942 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 ZNF512BQ96KM6 892 aaPredicted RBP10.55□□□□□ -0.72
LINC01940-201ENST00000455228 TBCCD1Q9NVR7 557 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 PNMA2Q9UL42 364 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 TBC1D30Q9Y2I9 924 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 CAMTA1Q9Y6Y1 1673 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 DPPA5A6NC42 116 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 C5orf60A6NFR6 353 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 BTBD19C9JJ37 291 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 IRS4O14654 1257 aaPredicted RBP10.55□□□□□ -0.72
LINC01940-201ENST00000455228 PRDM1O75626 825 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 ANP32DO95626 131 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 VARSP26640 1264 aaKnown RBP10.55□□□□□ -0.72
LINC01940-201ENST00000455228 RXRBP28702 533 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 HOXD11P31277 338 aaPredicted RBP10.55□□□□□ -0.72
LINC01940-201ENST00000455228 NLRP5P59047 1200 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 BOLA3Q53S33 107 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 ANKRD20A8PQ5CZ79 823 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 SYT2Q8N9I0 419 aaPredicted RBP10.55□□□□□ -0.72
LINC01940-201ENST00000455228 PLA2G12BQ9BX93 195 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 EPN3Q9H201 632 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 NDST4Q9H3R1 872 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 RABEP2Q9H5N1 569 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 SSX2IPQ9Y2D8 614 aa10.55□□□□□ -0.72
LINC01940-201ENST00000455228 V9GY48 417 aaPredicted RBP10.55□□□□□ -0.72
LINC01940-201ENST00000455228 GSG1L2A8MUP6 293 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 STK10O94804 968 aaKnown RBP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 NDUFA10O95299 355 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 RPSAP08865 295 aaKnown RBP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 CTSWP56202 376 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 TRIM28Q13263 835 aaKnown RBP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 PUM3Q15397 648 aaKnown RBP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 ESX1Q8N693 406 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 NELFBQ8WX92 580 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 SENP7Q9BQF6 1050 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 RNF26Q9BY78 433 aaPredicted RBP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 FAM192AQ9GZU8 254 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 OCEL1Q9H607 264 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 LRP2BPQ9P2M1 347 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 LUC7L2Q9Y383 392 aaKnown RBP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 SAR1BQ9Y6B6 198 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 WDR17Q8IZU2 1322 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 TCRBV5S4A2TA0A5A2 114 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 SMIM24O75264 130 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 FOSL1P15407 271 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 GNAT2P19087 354 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 TCP11X2Q5H9J9 407 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 OR52E8Q6IFG1 317 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 LPIN2Q92539 896 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 CHP1Q99653 195 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 SLC39A3Q9BRY0 314 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 CCDC28BQ9BUN5 200 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 TRIM10Q9UDY6 481 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 ATRNO75882 1429 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 GSTA1P08263 222 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 SLC5A1P13866 664 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 CDK17Q00537 523 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 PTGDRQ13258 359 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 ADAM9Q13443 819 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 STIM1Q13586 685 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 SPIDRQ14159 915 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 TTC38Q5R3I4 469 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 ESR2Q92731 530 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 ZNF653Q96CK0 615 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 HAUS4Q9H6D7 363 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 NOP53Q9NZM5 478 aaKnown RBP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 LIMA1Q9UHB6 759 aaKnown RBP10.54□□□□□ -0.72
LINC01940-201ENST00000455228 RWDD2AQ9UIY3 292 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 FER1L4A9Z1Z3 1794 aa10.54□□□□□ -0.72
LINC01940-201ENST00000455228 GOLGA8KD6RF30 607 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 ZMYND10O75800 440 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 NAA35Q5VZE5 725 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 COG1Q8WTW3 980 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 STAMBPL1Q96FJ0 436 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 CDK5RAP3Q96JB5 506 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 PCMTD1Q96MG8 357 aaPredicted RBP10.53□□□□□ -0.72
LINC01940-201ENST00000455228 NDNQ99608 321 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 CCDC68Q9H2F9 335 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 ZNHIT6Q9NWK9 470 aaKnown RBP10.53□□□□□ -0.72
LINC01940-201ENST00000455228 RMND1Q9NWS8 449 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 NR2E3Q9Y5X4 410 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 TNKSO95271 1327 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 RIC1Q4ADV7 1423 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 RNF225M0QZC1 329 aaPredicted RBP10.53□□□□□ -0.72
LINC01940-201ENST00000455228 PPIP5K2O43314 1243 aa10.53□□□□□ -0.72
LINC01940-201ENST00000455228 STRNO43815 780 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms