RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 MRRFQ96E11 262 aaKnown RBP15.14■□□□□ 0.01
UBE2D3-210ENST00000453744 CCDC87Q9NVE4 849 aa15.14■□□□□ 0.01
UBE2D3-210ENST00000453744 NFAT5O94916 1531 aa15.14■□□□□ 0.01
UBE2D3-210ENST00000453744 TBCAO75347 108 aaKnown RBP15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 SMTNP53814 917 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 NBPF5PQ86XG9 351 aaPredicted RBP15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 NLRP3Q96P20 1036 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 PSMD1Q99460 953 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 LAMA4Q16363 1823 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 A0A1W2PQJ5 194 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 XRCC5P13010 732 aaKnown RBP15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 ITGA4P13612 1032 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 CALRP27797 417 aaKnown RBP15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 VPS41P49754 854 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 GUF1Q8N442 669 aaKnown RBP15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 C7orf25Q9BPX7 421 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 BARHL2Q9NY43 387 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 RASAL2Q9UJF2 1139 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 KDM3BQ7LBC6 1761 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 SPATA31A3Q5VYP0 1347 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 PRLRP16471 622 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 KLRK1P26718 216 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 CYP4A11Q02928 519 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 KCNH2Q12809 1159 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 SLC18A3Q16572 532 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 ERFEQ4G0M1 354 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 PARP10Q53GL7 1025 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 IQCKQ8N0W5 287 aa15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 MTRF1LQ9UGC7 380 aaKnown RBP15.13■□□□□ 0.01
UBE2D3-210ENST00000453744 ZC3H4Q9UPT8 1303 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 LRCH2Q5VUJ6 765 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 FAM84BQ96KN1 310 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 DAAM1Q9Y4D1 1078 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 FSBPO95073 299 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 IL6STP40189 918 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 COASYQ13057 564 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 PABPC4Q13310 644 aaKnown RBP eCLIP15.12■□□□□ 0.011e-7■■■□□ 18.6
UBE2D3-210ENST00000453744 CUL1Q13616 776 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 ANKS1AQ92625 1134 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 CELF1Q92879 486 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 SGSM3Q96HU1 749 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 TAOK3Q9H2K8 898 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 EMILIN3Q9NT22 766 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 CTTNBP2NLQ9P2B4 639 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 AFDNP55196 1824 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 PCP11498 1178 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 SLC9A1P19634 815 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 TNFAIP3P21580 790 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 NAB2Q15742 525 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 QPCTQ16769 361 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 CCDC105Q8IYK2 499 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 GPR101Q96P66 508 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 CARD10Q9BWT7 1032 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 TMBIM4Q9HC24 238 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 RIC8AQ9NPQ8 531 aa15.12■□□□□ 0.01
UBE2D3-210ENST00000453744 CDC25CP30307 473 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 TTYH3Q9C0H2 523 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 HDAC9Q9UKV0 1011 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 SSU72P8A0A1W2PR75 194 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 GCNT3O95395 438 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 EPB41P11171 864 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 NEFHP12036 1026 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 SLC16A2P36021 539 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 CRKLP46109 303 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 SCTRP47872 440 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 RPS8P62241 208 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 PTK2Q05397 1052 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 PPP4R3AQ6IN85 833 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 CHMP6Q96FZ7 201 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 RAB17Q9H0T7 212 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 AZI2Q9H6S1 392 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 DDX25Q9UHL0 483 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 TPX2Q9ULW0 747 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 BCS1LQ9Y276 419 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 SIK3Q9Y2K2 1263 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 UBR1Q8IWV7 1749 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 TOPAZ1Q8N9V7 1692 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 BIRC3Q13489 604 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 CENPPQ6IPU0 288 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 GALNT17Q6IS24 598 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 DGKHQ86XP1 1220 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 SH3RF3Q8TEJ3 882 aaPredicted RBP15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 NSUN4Q96CB9 384 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 PBKQ96KB5 322 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
UBE2D3-210ENST00000453744 STXBP3O00186 592 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 STAT1P42224 750 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 TEX2Q8IWB9 1127 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 METTL13Q8N6R0 699 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 KCNV2Q8TDN2 545 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 KLHL29Q96CT2 875 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 FAM167BQ9BTA0 163 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 ISCUQ9H1K1 167 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 STK17AQ9UEE5 414 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 ANAPC4Q9UJX5 808 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 LEMD3Q9Y2U8 911 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 GRID2IPA4D2P6 1211 aa15.1■□□□□ 0.01
UBE2D3-210ENST00000453744 CLGNO14967 610 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms