RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 EPHA7Q15375 998 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 HAUS3Q68CZ6 603 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 FMR1NBQ8N0W7 255 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-203ENST00000449049 SNX29Q8TEQ0 813 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 A0A087X0B3 334 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 WDR64B1ANS9 1081 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 ELNP15502 786 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 SMPD1P17405 629 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 HYIQ5T013 277 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 MIER3Q7Z3K6 550 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 SLAIN1Q8ND83 568 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 TRPV1Q8NER1 839 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 COPS5Q92905 334 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 EMID1Q96A84 441 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-203ENST00000449049 EIF2AK1Q9BQI3 630 aaKnown RBP15.79■□□□□ 0.12
SHMT2-203ENST00000449049 POLR3CQ9BUI4 534 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-203ENST00000449049 DISC1Q9NRI5 854 aa15.79■□□□□ 0.12
SHMT2-203ENST00000449049 ADCY6O43306 1168 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 ATG7O95352 703 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 GH1P01241 217 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 RPA1P27694 616 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 ACTR2P61160 394 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 TNFAIP2Q03169 654 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 ARHGAP1Q07960 439 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 CACNB2Q08289 660 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-203ENST00000449049 TRIM32Q13049 653 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 MAP3K21Q5TCX8 1036 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 DHX37Q8IY37 1157 aaKnown RBP15.78■□□□□ 0.12
SHMT2-203ENST00000449049 NEK9Q8TD19 979 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 HSD17B14Q9BPX1 270 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 MLXIPQ9HAP2 919 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 CCDC39Q9UFE4 941 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 TELO2Q9Y4R8 837 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 KDM3AQ9Y4C1 1321 aa15.78■□□□□ 0.12
SHMT2-203ENST00000449049 SORBS3O60504 671 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 MED24O75448 989 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 NR1I2O75469 434 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 SPATA31C1P0DKV0 1188 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 HSPA1AP0DMV8 641 aaKnown RBP15.77■□□□□ 0.12
SHMT2-203ENST00000449049 HSPA1BP0DMV9 641 aaKnown RBP15.77■□□□□ 0.12
SHMT2-203ENST00000449049 SYKP43405 635 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 LAMC2Q13753 1193 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 KARSQ15046 597 aaKnown RBP15.77■□□□□ 0.12
SHMT2-203ENST00000449049 KLHL40Q2TBA0 621 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 CALML4Q96GE6 196 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 PNMA5Q96PV4 448 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 PYM1Q9BRP8 204 aaKnown RBP15.77■□□□□ 0.12
SHMT2-203ENST00000449049 TUFT1Q9NNX1 390 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 FAM184BQ9ULE4 1060 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 GNEQ9Y223 722 aaKnown RBP15.77■□□□□ 0.12
SHMT2-203ENST00000449049 PCDHA10Q9Y5I2 948 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 PTCH2Q9Y6C5 1203 aa15.77■□□□□ 0.12
SHMT2-203ENST00000449049 AKR1A1P14550 325 aa15.77■□□□□ 0.11
SHMT2-203ENST00000449049 MUTP22033 750 aa15.77■□□□□ 0.11
SHMT2-203ENST00000449049 CCT6AP40227 531 aaKnown RBP15.77■□□□□ 0.11
SHMT2-203ENST00000449049 GRB10Q13322 594 aa15.77■□□□□ 0.11
SHMT2-203ENST00000449049 E2F4Q16254 413 aa15.77■□□□□ 0.11
SHMT2-203ENST00000449049 SKOR2Q2VWA4 1001 aaPredicted RBP15.77■□□□□ 0.11
SHMT2-203ENST00000449049 TMEM119Q4V9L6 283 aa15.77■□□□□ 0.11
SHMT2-203ENST00000449049 GJC2Q5T442 439 aaPredicted RBP15.77■□□□□ 0.11
SHMT2-203ENST00000449049 ABHD15Q6UXT9 468 aa15.77■□□□□ 0.11
SHMT2-203ENST00000449049 CATSPER3Q86XQ3 398 aa15.77■□□□□ 0.11
SHMT2-203ENST00000449049 PTPN22Q9Y2R2 807 aa15.77■□□□□ 0.11
SHMT2-203ENST00000449049 SAMM50Q9Y512 469 aa15.77■□□□□ 0.11
SHMT2-203ENST00000449049 GSTTP1A0A1W2PQM5 241 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 POLR2DO15514 142 aaKnown RBP15.76■□□□□ 0.11
SHMT2-203ENST00000449049 ZNF202O95125 648 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 PRKAR2AP13861 404 aaKnown RBP15.76■□□□□ 0.11
SHMT2-203ENST00000449049 ECM1Q16610 540 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 PDILTQ8N807 584 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 DYDC2Q96IM9 177 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 GPR20Q99678 358 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 NT5C3AQ9H0P0 336 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 DACT1Q9NYF0 836 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 Q9Y3F1 56 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 IGKV6D-21A0A0A0MT36 114 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 SLITRK3O94933 977 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 P4HBP07237 508 aaKnown RBP15.76■□□□□ 0.11
SHMT2-203ENST00000449049 PSAPP07602 524 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 SUPT20HL2P0C7V6 817 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 PLCG1P19174 1290 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 PTGS1P23219 599 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 GRK4P32298 578 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 CTCFP49711 727 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-203ENST00000449049 SP4Q02446 784 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 HSDL1Q3SXM5 330 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 MIS18BP1Q6P0N0 1132 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 SPATA33Q96N06 139 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 PANK2Q9BZ23 570 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 RGL1Q9NZL6 768 aa15.76■□□□□ 0.11
SHMT2-203ENST00000449049 POTEB3A0JP26 581 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 POTEFA5A3E0 1075 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 SEPT4O43236 478 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 TRAK2O60296 914 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 CYP4A11Q02928 519 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 NAALADL2Q58DX5 795 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 RRAGBQ5VZM2 374 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 POTEBQ6S5H4 581 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 KCTD17Q8N5Z5 321 aa15.75■□□□□ 0.11
SHMT2-203ENST00000449049 IQUBQ8NA54 791 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms