RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 RPGRIP1Q96KN7 1286 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 RIPOR3Q96MK2 946 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 SPATA33Q96N06 139 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 TTC14Q96N46 770 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 MFRPQ9BY79 579 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 RNPEPQ9H4A4 650 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 COL20A1Q9P218 1284 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 USP15Q9Y4E8 981 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-203ENST00000447360 FRYLO94915 3013 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 ABCB11O95342 1321 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 FSD2A1L4K1 749 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 H3BRB1 525 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 RBAK-RBAKDNI3L0D1 243 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 NR3C2P08235 984 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 CTSHP09668 335 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 CTDSPL2Q05D32 466 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 BTG3Q14201 252 aaPredicted RBP8.28□□□□□ -1.08
LRRC28-203ENST00000447360 FAM26DQ5JW98 314 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 ZMYM1Q5SVZ6 1142 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 SPPL3Q8TCT6 385 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 SUSD6Q92537 303 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 TBC1D5Q92609 795 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 SEC62Q99442 399 aaKnown RBP8.28□□□□□ -1.08
LRRC28-203ENST00000447360 OSBPL7Q9BZF2 842 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 CHMP4BQ9H444 224 aaKnown RBP8.28□□□□□ -1.08
LRRC28-203ENST00000447360 TUT1Q9H6E5 874 aaKnown RBP8.28□□□□□ -1.08
LRRC28-203ENST00000447360 PXMP2Q9NR77 195 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 DDX19BQ9UMR2 479 aa8.28□□□□□ -1.08
LRRC28-203ENST00000447360 ENPP3O14638 875 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 FOXP2O15409 715 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 SMARCA5O60264 1052 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-203ENST00000447360 KDM4AO75164 1064 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 ZMYND10O75800 440 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 DGKIO75912 1065 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 RGS20O76081 388 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 GGPS1O95749 300 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 GLP2RO95838 553 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 ITGB1P05556 798 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 SMIM10L2AP0DMW4 78 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 SMIM10L2BP0DMW5 78 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 HSPD1P10809 573 aaKnown RBP8.27□□□□□ -1.09
LRRC28-203ENST00000447360 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
LRRC28-203ENST00000447360 EIF2AK2P19525 551 aaKnown RBP8.27□□□□□ -1.09
LRRC28-203ENST00000447360 DNAJB1P25685 340 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 NRIP1P48552 1158 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 MCTP2Q6DN12 878 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 UBALD2Q8IYN6 164 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 NKD2Q969F2 451 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-203ENST00000447360 USP26Q9BXU7 913 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 EHMT1Q9H9B1 1298 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 BARX2Q9UMQ3 279 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-203ENST00000447360 MRPL11Q9Y3B7 192 aaKnown RBP8.27□□□□□ -1.09
LRRC28-203ENST00000447360 NCOR2Q9Y618 2525 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 MYH7P12883 1935 aa8.27□□□□□ -1.09
LRRC28-203ENST00000447360 CACNA1BQ00975 2339 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 CSPG5O95196 566 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 LGALS2P05162 132 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 ADAM17P78536 824 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 GHRHRQ02643 423 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 ALX1Q15699 326 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 CDC37Q16543 378 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-203ENST00000447360 ADGRD2Q7Z7M1 963 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 VSIG10LQ86VR7 867 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 CMTR2Q8IYT2 770 aaKnown RBP8.26□□□□□ -1.09
LRRC28-203ENST00000447360 ADSSL1Q8N142 457 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 ATP8B4Q8TF62 1192 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 POF1BQ8WVV4 589 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 CDCA3Q99618 268 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-203ENST00000447360 TLE6Q9H808 572 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 MLXIPQ9HAP2 919 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 SETD4Q9NVD3 440 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 MAP3K20Q9NYL2 800 aaKnown RBP8.26□□□□□ -1.09
LRRC28-203ENST00000447360 EP300Q09472 2414 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-203ENST00000447360 KMT2EQ8IZD2 1858 aa8.26□□□□□ -1.09
LRRC28-203ENST00000447360 PDGFBP01127 241 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-203ENST00000447360 CHRNA1P02708 482 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 GHRP10912 638 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 PCP11498 1178 aaKnown RBP8.25□□□□□ -1.09
LRRC28-203ENST00000447360 UBA1P22314 1058 aaKnown RBP8.25□□□□□ -1.09
LRRC28-203ENST00000447360 HSD17B4P51659 736 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 SP2Q02086 613 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 UBE3AQ05086 875 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 RRP12Q5JTH9 1297 aaKnown RBP8.25□□□□□ -1.09
LRRC28-203ENST00000447360 TSHZ3Q63HK5 1081 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 TAF2Q6P1X5 1199 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 TMEM184AQ6ZMB5 413 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 STOX1Q6ZVD7 989 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 ZBTB33Q86T24 672 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 RBM23Q86U06 439 aaKnown RBP8.25□□□□□ -1.09
LRRC28-203ENST00000447360 ADGRF4Q8IZF3 695 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 CRIPAKQ8N1N5 446 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 SAMD3Q8N6K7 520 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 KLHL23Q8NBE8 558 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 NEK1Q96PY6 1258 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 PDCD2LQ9BRP1 358 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 UBA5Q9GZZ9 404 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 TOMM22Q9NS69 142 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 ZNF215Q9UL58 517 aaPredicted RBP8.25□□□□□ -1.09
LRRC28-203ENST00000447360 MRPL42Q9Y6G3 142 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms