RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 BTNL9Q6UXG8 535 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 NAP1L4Q99733 375 aaKnown RBP18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 CYP3A7-CYP3A51PA0A087WV96 503 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 CLIC2O15247 247 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 CYP3A7P24462 503 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 ARHGAP25P42331 645 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 CACNA2D4Q7Z3S7 1137 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 MRFAP1Q9Y605 127 aa18.61■□□□□ 0.57
LAPTM4B-201ENST00000445593 BRD2P25440 801 aaKnown RBP18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 HERVK_113P62684 666 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 MAN2A1Q16706 1144 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 ANKRD13CQ8N6S4 541 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 DNAJC7Q99615 494 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 DEF6Q9H4E7 631 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 RCCD1A6NED2 376 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 GAS7O60861 476 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 TADA3O75528 432 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 GCNT3O95395 438 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 EHHADHQ08426 723 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 MICALL2Q8IY33 904 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 BANK1Q8NDB2 785 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 ZNF397Q8NF99 534 aaPredicted RBP18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 LACRTQ9GZZ8 138 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 RABGAP1Q9Y3P9 1069 aa18.6■□□□□ 0.57
LAPTM4B-201ENST00000445593 SEC31AO94979 1220 aaKnown RBP18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 MAP3K9P80192 1104 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 FKBP3Q00688 224 aaKnown RBP18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 ADAM9Q13443 819 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 Q4G0T1 1027 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 TCERG1LQ5VWI1 586 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 VAV3Q9UKW4 847 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 COL4A3BPQ9Y5P4 624 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 LRRC53A6NM62 1247 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 NFKBIEO00221 500 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 FLOT1O75955 427 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 IPO7O95373 1038 aaKnown RBP18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 ASNSP08243 561 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 NR2F2P24468 414 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 RPA1P27694 616 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 EPS15P42566 896 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 GIT2Q14161 759 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 TDRD12Q587J7 1177 aaKnown RBP18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 DCAF17Q5H9S7 520 aaPredicted RBP18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 IL31RAQ8NI17 732 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 ZNF577Q9BSK1 485 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 TTYH3Q9C0H2 523 aa18.59■□□□□ 0.57
LAPTM4B-201ENST00000445593 IGLV3-22A0A075B6J6 115 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 CTAGE9A4FU28 777 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 SORBS3O60504 671 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 SRGAP2O75044 1071 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 TBCAO75347 108 aaKnown RBP18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 GMPSP49915 693 aaPredicted RBP18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 R3HDM1Q15032 1099 aaKnown RBP18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 AGBL3Q8NEM8 1001 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 CAPZA3Q96KX2 299 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 CCDC42Q96M95 316 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 SAMM50Q9Y512 469 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 PPP1R2P41236 205 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 ZBED6P86452 979 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 MTMR2Q13614 643 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 COL20A1Q9P218 1284 aa18.58■□□□□ 0.57
LAPTM4B-201ENST00000445593 ZC2HC1CQ53FD0 456 aaPredicted RBP18.58■□□□□ 0.56
LAPTM4B-201ENST00000445593 NBPF12Q5TAG4 269 aaPredicted RBP18.58■□□□□ 0.56
LAPTM4B-201ENST00000445593 ZKSCAN4Q969J2 545 aaPredicted RBP18.58■□□□□ 0.56
LAPTM4B-201ENST00000445593 MBOAT7Q96N66 472 aa18.58■□□□□ 0.56
LAPTM4B-201ENST00000445593 TUBB4AP04350 444 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 EIF2AK2P19525 551 aaKnown RBP18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 NMT1P30419 496 aaKnown RBP18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 CLCN6P51797 869 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 GRIPAP1Q4V328 841 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 HYIQ5T013 277 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 PSMB7Q99436 277 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 LSM14BQ9BX40 385 aaKnown RBP18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 WRAP73Q9P2S5 460 aaPredicted RBP18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 MRPL11Q9Y3B7 192 aaKnown RBP18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 ZNF646O15015 1829 aaPredicted RBP18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 FGFR1OPO95684 399 aaKnown RBP18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 PSMD2Q13200 908 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 DLK2Q6UY11 383 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 JAKMIP2Q96AA8 810 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 FAM20AQ96MK3 541 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 RANBP17Q9H2T7 1088 aaKnown RBP18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 PCDHA2Q9Y5H9 948 aa18.57■□□□□ 0.56
LAPTM4B-201ENST00000445593 MYCLP12524 364 aaPredicted RBP18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 DNA2P51530 1060 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 POLR2FP61218 127 aaKnown RBP18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 CEP55Q53EZ4 464 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 NSMFQ6X4W1 530 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 MYCT1Q8N699 235 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 NEK11Q8NG66 645 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 SIK3Q9Y2K2 1263 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 CTDP1Q9Y5B0 961 aaPredicted RBP18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 AKR1B10O60218 316 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 RHOXF2BP0C7M4 288 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 SPP2Q13103 211 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 WNK4Q96J92 1243 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 ERGIC2Q96RQ1 377 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms