RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 JPH1Q9HDC5 661 aaPredicted RBP27.2■■□□□ 1.94
C9orf3-207ENST00000445181 SCN10AQ9Y5Y9 1956 aa27.2■■□□□ 1.94
C9orf3-207ENST00000445181 IGLV3-22A0A075B6J6 115 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 F2P00734 622 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 CIITAP33076 1130 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 PSEN2P49810 448 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 CCL23P55773 120 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 MFSD10Q14728 455 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 UTP14CQ5TAP6 766 aaKnown RBP27.19■■□□□ 1.94
C9orf3-207ENST00000445181 ZNF697Q5TEC3 545 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 KRT40Q6A162 431 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 FAM161BQ96MY7 647 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 ZNF577Q9BSK1 485 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 IL23AQ9NPF7 189 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 SLC9A2Q9UBY0 812 aa27.19■■□□□ 1.94
C9orf3-207ENST00000445181 NFASCO94856 1347 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 MMP1P03956 469 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 LGALS2P05162 132 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 CYP2C9P11712 490 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 INF2Q27J81 1249 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 KIAA0753Q2KHM9 967 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 PIK3AP1Q6ZUJ8 805 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 ZNF365Q70YC5 407 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 C7orf31Q8N865 590 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 SEPT1Q8WYJ6 367 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 C8orf76Q96K31 380 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 UIMC1Q96RL1 719 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 TELO2Q9Y4R8 837 aa27.18■■□□□ 1.94
C9orf3-207ENST00000445181 IPO5O00410 1097 aaKnown RBP27.17■■□□□ 1.94
C9orf3-207ENST00000445181 TCF7P36402 384 aaPredicted RBP27.17■■□□□ 1.94
C9orf3-207ENST00000445181 PTPN11Q06124 597 aaPredicted RBP27.17■■□□□ 1.94
C9orf3-207ENST00000445181 ITGB3BPQ13352 177 aaPredicted RBP27.17■■□□□ 1.94
C9orf3-207ENST00000445181 PSRC1Q6PGN9 363 aaPredicted RBP27.17■■□□□ 1.94
C9orf3-207ENST00000445181 STXBP5LQ9Y2K9 1186 aa27.17■■□□□ 1.94
C9orf3-207ENST00000445181 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.16■■□□□ 1.94
C9orf3-207ENST00000445181 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.16■■□□□ 1.94
C9orf3-207ENST00000445181 H3BRB1 525 aa27.16■■□□□ 1.94
C9orf3-207ENST00000445181 DDX39AO00148 427 aaKnown RBP27.16■■□□□ 1.94
C9orf3-207ENST00000445181 GUCY1B3Q02153 619 aa27.16■■□□□ 1.94
C9orf3-207ENST00000445181 NR5A1Q13285 461 aa27.16■■□□□ 1.94
C9orf3-207ENST00000445181 SAFBQ15424 915 aaKnown RBP eCLIP27.16■■□□□ 1.94
C9orf3-207ENST00000445181 C16orf70Q9BSU1 422 aa27.16■■□□□ 1.94
C9orf3-207ENST00000445181 WNT8AQ9H1J5 351 aa27.16■■□□□ 1.94
C9orf3-207ENST00000445181 TUT1Q9H6E5 874 aaKnown RBP27.16■■□□□ 1.94
C9orf3-207ENST00000445181 TCEAL9Q9UHQ7 104 aa27.16■■□□□ 1.94
C9orf3-207ENST00000445181 ZNF215Q9UL58 517 aaPredicted RBP27.16■■□□□ 1.94
C9orf3-207ENST00000445181 NOD1Q9Y239 953 aa27.16■■□□□ 1.94
C9orf3-207ENST00000445181 LETM2Q2VYF4 491 aa27.15■■□□□ 1.94
C9orf3-207ENST00000445181 DIS3L2Q8IYB7 885 aaKnown RBP27.15■■□□□ 1.94
C9orf3-207ENST00000445181 SEMA6BQ9H3T3 888 aa27.15■■□□□ 1.94
C9orf3-207ENST00000445181 LAMA2P24043 3122 aaKnown RBP27.14■■□□□ 1.94
C9orf3-207ENST00000445181 GSTTP1A0A1W2PQM5 241 aa27.14■■□□□ 1.94
C9orf3-207ENST00000445181 TDP2O95551 362 aa27.14■■□□□ 1.94
C9orf3-207ENST00000445181 FGBP02675 491 aa27.14■■□□□ 1.94
C9orf3-207ENST00000445181 RASIP1Q5U651 963 aa27.14■■□□□ 1.94
C9orf3-207ENST00000445181 NEK8Q86SG6 692 aa27.14■■□□□ 1.94
C9orf3-207ENST00000445181 TRIM50Q86XT4 487 aa27.14■■□□□ 1.94
C9orf3-207ENST00000445181 GUCD1Q96NT3 240 aa27.14■■□□□ 1.94
C9orf3-207ENST00000445181 TBC1D22BQ9NU19 505 aa27.14■■□□□ 1.94
C9orf3-207ENST00000445181 KIF3AQ9Y496 699 aa27.14■■□□□ 1.94
C9orf3-207ENST00000445181 BTBD18B2RXH4 712 aa27.13■■□□□ 1.93
C9orf3-207ENST00000445181 HAS3O00219 553 aa27.13■■□□□ 1.93
C9orf3-207ENST00000445181 EDIL3O43854 480 aa27.13■■□□□ 1.93
C9orf3-207ENST00000445181 ACTR2P61160 394 aa27.13■■□□□ 1.93
C9orf3-207ENST00000445181 GLG1Q92896 1179 aa27.13■■□□□ 1.93
C9orf3-207ENST00000445181 LENG9Q96B70 501 aa27.13■■□□□ 1.93
C9orf3-207ENST00000445181 SCLYQ96I15 445 aa27.13■■□□□ 1.93
C9orf3-207ENST00000445181 HDAC6Q9UBN7 1215 aa27.13■■□□□ 1.93
C9orf3-207ENST00000445181 CYP3A7-CYP3A51PA0A087WV96 503 aa27.12■■□□□ 1.93
C9orf3-207ENST00000445181 CYP3A7P24462 503 aa27.12■■□□□ 1.93
C9orf3-207ENST00000445181 PTGISQ16647 500 aa27.12■■□□□ 1.93
C9orf3-207ENST00000445181 Q4G0T1 1027 aa27.12■■□□□ 1.93
C9orf3-207ENST00000445181 MOXD1Q6UVY6 613 aa27.12■■□□□ 1.93
C9orf3-207ENST00000445181 SESTD1Q86VW0 696 aa27.12■■□□□ 1.93
C9orf3-207ENST00000445181 RPUSD2Q8IZ73 545 aaKnown RBP27.12■■□□□ 1.93
C9orf3-207ENST00000445181 HERVK_113Q902F9 699 aa27.12■■□□□ 1.93
C9orf3-207ENST00000445181 AZI2Q9H6S1 392 aa27.12■■□□□ 1.93
C9orf3-207ENST00000445181 DDX25Q9UHL0 483 aaKnown RBP27.12■■□□□ 1.93
C9orf3-207ENST00000445181 MSH4O15457 936 aa27.11■■□□□ 1.93
C9orf3-207ENST00000445181 CCNT1O60563 726 aaKnown RBP27.11■■□□□ 1.93
C9orf3-207ENST00000445181 GNL2Q13823 731 aaKnown RBP27.11■■□□□ 1.93
C9orf3-207ENST00000445181 EARS2Q5JPH6 523 aaKnown RBP27.11■■□□□ 1.93
C9orf3-207ENST00000445181 GDF6Q6KF10 455 aaPredicted RBP27.11■■□□□ 1.93
C9orf3-207ENST00000445181 NAP1L4Q99733 375 aaKnown RBP27.11■■□□□ 1.93
C9orf3-207ENST00000445181 TTYH1Q9H313 450 aaPredicted RBP27.11■■□□□ 1.93
C9orf3-207ENST00000445181 SMARCAD1Q9H4L7 1026 aa27.11■■□□□ 1.93
C9orf3-207ENST00000445181 GTF2IRD1Q9UHL9 959 aa27.11■■□□□ 1.93
C9orf3-207ENST00000445181 FAM205CA6NFA0 338 aa27.1■■□□□ 1.93
C9orf3-207ENST00000445181 DHX15O43143 795 aaKnown RBP27.1■■□□□ 1.93
C9orf3-207ENST00000445181 OTOP2Q7RTS6 562 aa27.1■■□□□ 1.93
C9orf3-207ENST00000445181 FBXO18Q8NFZ0 1043 aa27.1■■□□□ 1.93
C9orf3-207ENST00000445181 TNFRSF25Q93038 417 aa27.1■■□□□ 1.93
C9orf3-207ENST00000445181 MTIF3Q9H2K0 278 aaKnown RBP27.1■■□□□ 1.93
C9orf3-207ENST00000445181 ERAP1Q9NZ08 941 aa27.1■■□□□ 1.93
C9orf3-207ENST00000445181 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.1■■□□□ 1.93
C9orf3-207ENST00000445181 GRXCR1A8MXD5 290 aa27.09■■□□□ 1.93
C9orf3-207ENST00000445181 GAS7O60861 476 aa27.09■■□□□ 1.93
C9orf3-207ENST00000445181 CCNE2O96020 404 aa27.09■■□□□ 1.93
C9orf3-207ENST00000445181 SMIM10L2AP0DMW4 78 aa27.09■■□□□ 1.93
C9orf3-207ENST00000445181 SMIM10L2BP0DMW5 78 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms