RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 HDAC11Q96DB2 347 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 TBC1D22BQ9NU19 505 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 CLIC4Q9Y696 253 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 ERCC6L2Q5T890 1561 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 SH2B2O14492 632 aaPredicted RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 PSMD6Q15008 389 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 KYAT1Q16773 422 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 CCNYQ8ND76 341 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 BEST2Q8NFU1 509 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 USP28Q96RU2 1077 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 FARP1Q9Y4F1 1045 aaPredicted RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 CLDN3O15551 220 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 PRPSAP2O60256 369 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 MTRQ99707 1265 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 INHBAP08476 426 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 ZNF18P17022 549 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 KPNA2P52292 529 aaKnown RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 OSTNP61366 133 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 SREBF2Q12772 1141 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 MICALL1Q8N3F8 863 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 XPO4Q9C0E2 1151 aaKnown RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 ZBTB5O15062 677 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 DNAAF3Q8N9W5 541 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 SPZ1Q9BXG8 430 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 PIK3C2BO00750 1634 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 ASPHQ12797 758 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 DYNLL2Q96FJ2 89 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 LSG1Q9H089 658 aaKnown RBP12.14□□□□□ -0.47
FN1-211ENST00000443816 MROH7-TTC4A0A0A0MT08 1334 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 GSPT1P15170 499 aaKnown RBP12.14□□□□□ -0.47
FN1-211ENST00000443816 TCP1P17987 556 aaKnown RBP12.14□□□□□ -0.47
FN1-211ENST00000443816 PMLP29590 882 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 KRT71Q3SY84 523 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 TMTC4Q5T4D3 741 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 HACL1Q9UJ83 578 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 TTC36A6NLP5 189 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 KIF28PB7ZC32 967 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 MEIS1O00470 390 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 SFNP31947 248 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 VPS72Q15906 364 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 LIFRP42702 1097 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 ZNF445P59923 1031 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 MAN2A1Q16706 1144 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 VSIG1Q86XK7 387 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 CLIC6Q96NY7 704 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 DDIT3P35638 169 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 KCNJ6P48051 423 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 MESDQ14696 234 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 RBBP5Q15291 538 aaKnown RBP12.14□□□□□ -0.47
FN1-211ENST00000443816 PPP1R18Q6NYC8 613 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
FN1-211ENST00000443816 P2RX5Q93086 422 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 ZNF653Q96CK0 615 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.14□□□□□ -0.47
FN1-211ENST00000443816 KATNAL1Q9BW62 490 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 PAMP19021 973 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 STX2P32856 288 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 THOC5Q13769 683 aaKnown RBP12.14□□□□□ -0.47
FN1-211ENST00000443816 RCSD1Q6JBY9 416 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
FN1-211ENST00000443816 PPP1R16BQ96T49 567 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 TRIM62Q9BVG3 475 aa12.14□□□□□ -0.47
FN1-211ENST00000443816 ARL6IP4Q66PJ3 421 aaKnown RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 RASGRP4Q8TDF6 673 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 PCIF1Q9H4Z3 704 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 UBE2TQ9NPD8 197 aaPredicted RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 ASB14A6NK59 587 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 RNF40O75150 1001 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 LRRN2O75325 713 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 CYP2E1P05181 493 aaPredicted RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 TXNRD1Q16881 649 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 PUS7LQ9H0K6 701 aaKnown RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 LCMT1Q9UIC8 334 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 UBN2Q6ZU65 1347 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 BUB1O43683 1085 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 CPP00450 1065 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 CDC42EP1Q00587 391 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 CHMP6Q96FZ7 201 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 PCDHA7Q9UN72 937 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 UBE2SQ16763 222 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 ARHGEF18Q6ZSZ5 1173 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 PRDM5Q9NQX1 630 aaPredicted RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 ZNF302Q9NR11 478 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 HUS1O60921 280 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 SNAPC2Q13487 334 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 WHAMMP3Q1A5X7 153 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 CDHR2Q9BYE9 1310 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 OSBPL3Q9H4L5 887 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms