RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SGO2Q562F6 1265 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 RASGRP4Q8TDF6 673 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 RNF139Q8WU17 664 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 CRKP46108 304 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 DBN1Q16643 649 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 Q3C1V9 767 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 UBE2TQ9NPD8 197 aaPredicted RBP17.16■□□□□ 0.34
PTPN13-204ENST00000436978 LRRC7Q96NW7 1537 aa17.16■□□□□ 0.34
PTPN13-204ENST00000436978 PPARGP37231 505 aaPredicted RBP17.15■□□□□ 0.34
PTPN13-204ENST00000436978 RCAN1P53805 252 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 MTERF2Q49AM1 385 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 MMEL1Q495T6 779 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 SUSD4Q5VX71 490 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 COA7Q96BR5 231 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 PPRC1Q5VV67 1664 aaKnown RBP17.15■□□□□ 0.34
PTPN13-204ENST00000436978 VPS41P49754 854 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
PTPN13-204ENST00000436978 FAN1Q9Y2M0 1017 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 FRMPD1Q5SYB0 1578 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 PRPSAP2O60256 369 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 THEM5Q8N1Q8 247 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 RYBPQ8N488 228 aaPredicted RBP17.15■□□□□ 0.34
PTPN13-204ENST00000436978 REREQ9P2R6 1566 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 C17orf53Q8N3J3 647 aaPredicted RBP17.15■□□□□ 0.34
PTPN13-204ENST00000436978 ATP6V0A4Q9HBG4 840 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 PGRMC1O00264 195 aaKnown RBP17.15■□□□□ 0.34
PTPN13-204ENST00000436978 TTI1O43156 1089 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 KRT1P04264 644 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 SRRM1Q8IYB3 904 aaKnown RBP17.15■□□□□ 0.34
PTPN13-204ENST00000436978 DDIT3P35638 169 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 KIAA1586Q9HCI6 787 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 EMILIN3Q9NT22 766 aa17.15■□□□□ 0.34
PTPN13-204ENST00000436978 LRRN2O75325 713 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 PHLDB3Q6NSJ2 640 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 TTLL11Q8NHH1 800 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 MSTO1Q9BUK6 570 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 ANGPTL3Q9Y5C1 460 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 TTC36A6NLP5 189 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 EVI5O60447 810 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 CCDC38Q502W7 563 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 PRKAB2O43741 272 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 MIGA2Q7L4E1 593 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 DPH5Q9H2P9 285 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 EPS15L1Q9UBC2 864 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 ZBTB5O15062 677 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 SAT1P21673 171 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 MXI1P50539 228 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 OSBP2Q969R2 916 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 MAGOHBQ96A72 148 aaKnown RBP17.14■□□□□ 0.33
PTPN13-204ENST00000436978 CAPS2Q9BXY5 557 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 ARHGAP42A6NI28 874 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 K7ERI5 159 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 ECEL1O95672 775 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 RBL2Q08999 1139 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 SH3RF3Q8TEJ3 882 aaPredicted RBP17.14■□□□□ 0.33
PTPN13-204ENST00000436978 ECE2O60344 883 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 MTMR1Q13613 665 aa17.14■□□□□ 0.33
PTPN13-204ENST00000436978 JADE1Q6IE81 842 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 BRINP3Q76B58 766 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 ELMOD1Q8N336 334 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 SRP68Q9UHB9 627 aaKnown RBP17.13■□□□□ 0.33
PTPN13-204ENST00000436978 SCINQ9Y6U3 715 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 CPDO75976 1380 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 MCAMP43121 646 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 ETF1P62495 437 aaKnown RBP17.13■□□□□ 0.33
PTPN13-204ENST00000436978 ADAT2Q7Z6V5 191 aaKnown RBP17.13■□□□□ 0.33
PTPN13-204ENST00000436978 PCDHA5Q9Y5H7 936 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 ZBTB33Q86T24 672 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 LINC00301Q8NCQ3 95 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 GUCY2DQ02846 1103 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 STXBP2Q15833 593 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 NDUFAF2Q8N183 169 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 MCPH1Q8NEM0 835 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 RABGGTAQ92696 567 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 ABCB11O95342 1321 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 SH3BGRP55822 239 aaPredicted RBP17.13■□□□□ 0.33
PTPN13-204ENST00000436978 DYNLL2Q96FJ2 89 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 PROM2Q8N271 834 aa17.13■□□□□ 0.33
PTPN13-204ENST00000436978 H7C1W4 665 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 MEIS1O00470 390 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 PDE1BQ01064 536 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 IQCB1Q15051 598 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 HEXIM2Q96MH2 286 aaKnown RBP17.12■□□□□ 0.33
PTPN13-204ENST00000436978 DIS3Q9Y2L1 958 aaKnown RBP17.12■□□□□ 0.33
PTPN13-204ENST00000436978 DLC1Q96QB1 1528 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 ACTN1P12814 892 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 DARS2Q6PI48 645 aaKnown RBP17.12■□□□□ 0.33
PTPN13-204ENST00000436978 FAM149B1Q96BN6 582 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 LRGUKQ96M69 825 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 HGSO14964 777 aaPredicted RBP17.12■□□□□ 0.33
PTPN13-204ENST00000436978 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 THOC5Q13769 683 aaKnown RBP17.12■□□□□ 0.33
PTPN13-204ENST00000436978 ANTXR1Q9H6X2 564 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 FER1L4A9Z1Z3 1794 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 PNMA8AQ86V59 439 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms