RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SHBGP04278 402 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 OR52Z1P0C646 297 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 MYBL1P10243 752 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 AGBL2Q5U5Z8 902 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 CAPRIN2Q6IMN6 1127 aaKnown RBP12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 C3orf20Q8ND61 904 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 KCNV2Q8TDN2 545 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 ZBTB10Q96DT7 871 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 C7orf25Q9BPX7 421 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 C15orf41Q9Y2V0 281 aa12.63□□□□□ -0.39
HMGCS1-202ENST00000433297 MYH7P12883 1935 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 C5orf60A6NFR6 353 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 PGRMC1O00264 195 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 ASIC2Q16515 512 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 PEX26Q7Z412 305 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 TMC3Q7Z5M5 1100 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 METTL13Q8N6R0 699 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 SAAL1Q96ER3 474 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 ZHX3Q9H4I2 956 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 ABCF3Q9NUQ8 709 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 LRP6O75581 1613 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 MYH6P13533 1939 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 CCDC26Q8TAB7 109 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 ZNF483Q8TF39 744 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 PLCD4Q9BRC7 762 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 MTFR1LQ9H019 292 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 INTS9Q9NV88 658 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 PCDHGC5Q9Y5F6 944 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 LAMB4A4D0S4 1761 aa12.62□□□□□ -0.39
HMGCS1-202ENST00000433297 A8MUI8 341 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 SLC8A3P57103 927 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 ERMARDQ5T6L9 678 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 TRIM68Q6AZZ1 485 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 TRPM8Q7Z2W7 1104 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 AGAP1Q9UPQ3 857 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 F8VZ95 297 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 STARD3NLO95772 234 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 GHRP10912 638 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 PPP1R2P41236 205 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 LRRC14Q15048 493 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 CCDC38Q502W7 563 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 FAM129AQ9BZQ8 928 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 NOP53Q9NZM5 478 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 CEP72Q9P209 647 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 JAG2Q9Y219 1238 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.61□□□□□ -0.395e-10■□□□□ 10
HMGCS1-202ENST00000433297 PKD1L3Q7Z443 1732 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 ACTN1P12814 892 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 PLTPP55058 493 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 IFI35P80217 286 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 TMED8Q6PL24 325 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 EGFL6Q8IUX8 553 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 P3H4Q92791 437 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 FMO2Q99518 471 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 AZI2Q9H6S1 392 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 MLXIPLQ9NP71 852 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 ANAPC4Q9UJX5 808 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 STX8Q9UNK0 236 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 SCN11AQ9UI33 1791 aa12.61□□□□□ -0.39
HMGCS1-202ENST00000433297 SPDYE3A6NKU9 549 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 RGS16O15492 202 aaPredicted RBP12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 NOL4O94818 638 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 UBOX5O94941 541 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 NAPAP54920 295 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 RCSD1Q6JBY9 416 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 PARD3BQ8TEW8 1205 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 SCFD2Q8WU76 684 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.6□□□□□ -0.398e-27■□□□□ 10.1
HMGCS1-202ENST00000433297 CUEDC2Q9H467 287 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 CNOT10Q9H9A5 744 aaKnown RBP12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 THRAP3Q9Y2W1 955 aaKnown RBP12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 FLT1P17948 1338 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 TFAP4Q01664 338 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 PTK2Q05397 1052 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 KLHL29Q96CT2 875 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 PBKQ96KB5 322 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 COL4A3BPQ9Y5P4 624 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 RGPD5Q99666 1765 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 ERVV-2B6SEH9 535 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 MYBP10242 640 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 IGHMBP2P38935 993 aaKnown RBP12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 AP1ARQ63HQ0 302 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 ZNF570Q96NI8 536 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 ECT2Q9H8V3 914 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 EBF2Q9HAK2 575 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 BIN2Q9UBW5 565 aaPredicted RBP12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 TMEM59LQ9UK28 342 aa12.6□□□□□ -0.39
HMGCS1-202ENST00000433297 LMTK3Q96Q04 1460 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 IGF2BP3O00425 579 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 FGGP02679 453 aa12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 ALDH5A1P51649 535 aaPredicted RBP12.59□□□□□ -0.39
HMGCS1-202ENST00000433297 USP11P51784 963 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms