RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ARVCFO00192 962 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 PRRG2O14669 202 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 WNT9AO14904 365 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 CRTAMO95727 393 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 CYP1A1P04798 512 aaPredicted RBP5.12□□□□□ -1.59
CLK1-204ENST00000432425 PYGMP11217 842 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 ZNF28P17035 718 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 CNR2P34972 360 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 EPHA5P54756 1037 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 BMS1Q14692 1282 aaKnown RBP5.12□□□□□ -1.59
CLK1-204ENST00000432425 GPR19Q15760 415 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 CRY1Q16526 586 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 C2orf27AQ580R0 203 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 ZFYVE27Q5T4F4 411 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 BORAQ6PGQ7 559 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 C16orf59Q7L2K0 433 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 FERMT3Q86UX7 667 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 NLGN4XQ8N0W4 816 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 TXNDC5Q8NBS9 432 aaKnown RBP5.12□□□□□ -1.59
CLK1-204ENST00000432425 PCDH19Q8TAB3 1148 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 DRC1Q96MC2 740 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 CD244Q9BZW8 370 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 RBPJLQ9UBG7 517 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 SFMBT1Q9UHJ3 866 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 CDK11AQ9UQ88 783 aaPredicted RBP5.12□□□□□ -1.59
CLK1-204ENST00000432425 TELO2Q9Y4R8 837 aa5.12□□□□□ -1.59
CLK1-204ENST00000432425 NCANO14594 1321 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 CELA3BP08861 270 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 IL13P35225 146 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 DNM2P50570 870 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 RTP5Q14D33 572 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 TRMT10BQ6PF06 316 aaKnown RBP5.11□□□□□ -1.59
CLK1-204ENST00000432425 ARHGAP36Q6ZRI8 547 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 PROSER1Q86XN7 944 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 JMYQ8N9B5 988 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 MRFAP1L1Q96HT8 127 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 LCORQ96JN0 433 aaPredicted RBP5.11□□□□□ -1.59
CLK1-204ENST00000432425 BDH2Q9BUT1 245 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 PDGFDQ9GZP0 370 aaPredicted RBP5.11□□□□□ -1.59
CLK1-204ENST00000432425 SLC52A2Q9HAB3 445 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 FTSJ1Q9UET6 329 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 SRPK3Q9UPE1 567 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 PTCH2Q9Y6C5 1203 aa5.11□□□□□ -1.59
CLK1-204ENST00000432425 CCDC66A2RUB6 948 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 PRICKLE3O43900 615 aaPredicted RBP5.1□□□□□ -1.59
CLK1-204ENST00000432425 FBXO21O94952 628 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 ENO2P09104 434 aaPredicted RBP5.1□□□□□ -1.59
CLK1-204ENST00000432425 KRT15P19012 456 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 BTBD8Q5XKL5 378 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 NPM2Q86SE8 214 aaKnown RBP5.1□□□□□ -1.59
CLK1-204ENST00000432425 LGI4Q8N135 537 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 DTX3Q8N9I9 347 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 SH3RF2Q8TEC5 729 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 MAGEB10Q96LZ2 347 aaPredicted RBP5.1□□□□□ -1.59
CLK1-204ENST00000432425 MRPL4Q9BYD3 311 aaKnown RBP5.1□□□□□ -1.59
CLK1-204ENST00000432425 TMEM168Q9H0V1 697 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 RIC8BQ9NVN3 520 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 WASF3Q9UPY6 502 aa5.1□□□□□ -1.59
CLK1-204ENST00000432425 TCRBV5S4A2TA0A5A2 114 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 CKMP06732 381 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 PDE6AP16499 860 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 MLLT6P55198 1093 aaPredicted RBP5.09□□□□□ -1.59
CLK1-204ENST00000432425 SKIDA1Q1XH10 827 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 TRIM61Q5EBN2 209 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 FIGNQ5HY92 759 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 CD276Q5ZPR3 534 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 OSTM1Q86WC4 334 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 PTRH1Q86Y79 214 aaKnown RBP5.09□□□□□ -1.59
CLK1-204ENST00000432425 ZCCHC14Q8WYQ9 949 aaKnown RBP5.09□□□□□ -1.59
CLK1-204ENST00000432425 UBXN4Q92575 508 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 CBLCQ9ULV8 474 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 ATP23Q9Y6H3 246 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 DUSP10Q9Y6W6 482 aa5.09□□□□□ -1.59
CLK1-204ENST00000432425 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.08□□□□□ -1.6
CLK1-204ENST00000432425 ZNF839A8K0R7 811 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 ACOT7O00154 380 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 PTPN1P18031 435 aaKnown RBP5.08□□□□□ -1.6
CLK1-204ENST00000432425 GJA4P35212 333 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 GLRBP48167 497 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 PFKPQ01813 784 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 PLP2Q04941 152 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 PHF19Q5T6S3 580 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 LILRB2Q8N423 598 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 GSTCDQ8NEC7 633 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 SLC7A14Q8TBB6 771 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 YTHDC1Q96MU7 727 aaKnown RBP5.08□□□□□ -1.6
CLK1-204ENST00000432425 ZSWIM4Q9H7M6 989 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 ARHGAP20Q9P2F6 1191 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 ZNF561-AS1K7EIQ3 104 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 MAN2B1O00754 1011 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 RASGRP1O95267 797 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 AMY2AP04746 511 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 AMY2BP19961 511 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 JAM2P57087 298 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 SMAD2Q15796 467 aaKnown RBP5.08□□□□□ -1.6
CLK1-204ENST00000432425 BRAPQ7Z569 592 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 PLEKHH3Q7Z736 793 aa5.08□□□□□ -1.6
CLK1-204ENST00000432425 CISD2Q8N5K1 135 aaKnown RBP5.08□□□□□ -1.6
CLK1-204ENST00000432425 IGDCC4Q8TDY8 1250 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms