RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 B4DLN1 442 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 CCNT1O60563 726 aaKnown RBP9.64□□□□□ -0.87
GABPB1-205ENST00000429662 RAD17O75943 681 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 LCA5LO95447 670 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 RASA1P20936 1047 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 CDC25AP30304 524 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 SLC20A2Q08357 652 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 GRAPQ13588 217 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 ZSCAN26Q16670 478 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 MAN2A1Q16706 1144 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 TUBB8Q3ZCM7 444 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 VWA3BQ502W6 1294 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 ANKRD40Q6AI12 368 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 KRT26Q7Z3Y9 468 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 GUF1Q8N442 669 aaKnown RBP9.64□□□□□ -0.87
GABPB1-205ENST00000429662 MMGT1Q8N4V1 131 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 GRAPLQ8TC17 118 aaPredicted RBP9.64□□□□□ -0.87
GABPB1-205ENST00000429662 ALS2CR12Q96Q35 445 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 VPS33BQ9H267 617 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 VPS18Q9P253 973 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 CNOT7Q9UIV1 285 aaKnown RBP9.64□□□□□ -0.87
GABPB1-205ENST00000429662 PLAGL2Q9UPG8 496 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 MAPK8IP1Q9UQF2 711 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 GPR75-ASB3A0A0A6YYF3 556 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 A0A0U1RQJ8 604 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 H3BQF6 201 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 PPEF1O14829 653 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 CYTH3O43739 400 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 GNA14O95837 355 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 TCP1P17987 556 aaKnown RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 EN2P19622 333 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 ATP2B4P23634 1241 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 LMAN1P49257 510 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 PMS1P54277 932 aaKnown RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 LETM2Q2VYF4 491 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 GRIPAP1Q4V328 841 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 ASPRV1Q53RT3 343 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 REXO1Q8N1G1 1221 aaKnown RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 RNF10Q8N5U6 811 aaKnown RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 CAGE1Q8TC20 777 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 RASGRP4Q8TDF6 673 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 SH3RF3Q8TEJ3 882 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 TBC1D22AQ8WUA7 517 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 ATRIPQ8WXE1 791 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 SYN2Q92777 582 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 CDK5RAP3Q96JB5 506 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 EYA3Q99504 573 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 GLT8D2Q9H1C3 349 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 RIOX1Q9H6W3 641 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 ZCCHC17Q9NP64 241 aaKnown RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 STX8Q9UNK0 236 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 BAZ2AQ9UIF9 1905 aaKnown RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 CDH23Q9H251 3354 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 ZSWIM8A7E2V4 1837 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 A0A0U1RQG5 324 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 SSU72P8A0A1W2PR75 194 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 PJA2O43164 708 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 COBLO75128 1261 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 ATP1A1P05023 1023 aaKnown RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 KLRK1P26718 216 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 TM4SF4P48230 202 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 CDK8P49336 464 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 CALCRLQ16602 461 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 GLE1Q53GS7 698 aaKnown RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 MIIPQ5JXC2 388 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 NCAPH2Q6IBW4 605 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 CCNI2Q6ZMN8 369 aaPredicted RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 NOA1Q8NC60 698 aaKnown RBP9.63□□□□□ -0.87
GABPB1-205ENST00000429662 SLC17A8Q8NDX2 589 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 NEK11Q8NG66 645 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 COG1Q8WTW3 980 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 TGFBRAP1Q8WUH2 860 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 DYNLL2Q96FJ2 89 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 MTMR9Q96QG7 549 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 CRACR2AQ9BSW2 395 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 ANKIB1Q9P2G1 1089 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 LRWD1Q9UFC0 647 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 ATP6V0A2Q9Y487 856 aa9.63□□□□□ -0.87
GABPB1-205ENST00000429662 MYO3BQ8WXR4 1341 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 WTIPA6NIX2 430 aaPredicted RBP9.62□□□□□ -0.87
GABPB1-205ENST00000429662 PP2D1A8MPX8 630 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 ADAMTS3O15072 1205 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 TBC1D12O60347 775 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 ABL1P00519 1130 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 IDEP14735 1019 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 GCFC2P16383 781 aaKnown RBP9.62□□□□□ -0.87
GABPB1-205ENST00000429662 CAPN2P17655 700 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 TNFRSF8P28908 595 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 PAFAH1B1P43034 410 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 ADCY7P51828 1080 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 STK4Q13043 487 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 SLC35G1Q2M3R5 365 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 KRT79Q5XKE5 535 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 MCTP2Q6DN12 878 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 PPP4R3AQ6IN85 833 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 MOB2Q70IA6 237 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms