RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CD209Q9NNX6 404 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 DDX39AO00148 427 aaKnown RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 OPA1O60313 960 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 ECM2O94769 699 aaPredicted RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 GCNT3O95395 438 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 NR2F2P24468 414 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 CCDC170Q8IYT3 715 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 CCDC97Q96F63 343 aaPredicted RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 AK8Q96MA6 479 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 CEP89Q96ST8 783 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 CAPS2Q9BXY5 557 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 PPANQ9NQ55 473 aaKnown RBP8.86□□□□□ -0.99
HPS4-205ENST00000429411 KBTBD4Q9NVX7 518 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 ARHGAP20Q9P2F6 1191 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 PCDHA1Q9Y5I3 950 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 CD2APQ9Y5K6 639 aa8.86□□□□□ -0.99
HPS4-205ENST00000429411 A0A1W2PQC6 194 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 POTEFA5A3E0 1075 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 EIF3CLB5ME19 914 aaKnown RBP8.85□□□□□ -0.99
HPS4-205ENST00000429411 KRT14P02533 472 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 POTEIP0CG38 1075 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 ACTN1P12814 892 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 PLCG2P16885 1265 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 GPSM2P81274 684 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 IRF5Q13568 498 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 KCNB1Q14721 858 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 ZFYVE27Q5T4F4 411 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 POTEGQ6S5H5 508 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 POTEEQ6S8J3 1075 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 CUL5Q93034 780 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 EIF3CQ99613 913 aaKnown RBP8.85□□□□□ -0.99
HPS4-205ENST00000429411 TAOK3Q9H2K8 898 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 DPH5Q9H2P9 285 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 TCEAL9Q9UHQ7 104 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 FEZ2Q9UHY8 353 aaPredicted RBP8.85□□□□□ -0.99
HPS4-205ENST00000429411 HPCAL4Q9UM19 191 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 SPDYE3A6NKU9 549 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 PSMD14O00487 310 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 KLRC4O43908 158 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 PRPF6O94906 941 aaKnown RBP8.85□□□□□ -0.99
HPS4-205ENST00000429411 TCP1P17987 556 aaKnown RBP8.85□□□□□ -0.99
HPS4-205ENST00000429411 TM4SF1P30408 202 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 HOXA13P31271 388 aaPredicted RBP8.85□□□□□ -0.99
HPS4-205ENST00000429411 FKBP3Q00688 224 aaKnown RBP8.85□□□□□ -0.99
HPS4-205ENST00000429411 AOC3Q16853 763 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 ARHGAP44Q17R89 818 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 CEP85LQ5SZL2 805 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 KCNK18Q7Z418 384 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 SYCP3Q8IZU3 236 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 MASTLQ96GX5 879 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 LZTS2Q9BRK4 669 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 RBM12Q9NTZ6 932 aaKnown RBP8.85□□□□□ -0.99
HPS4-205ENST00000429411 SNX12Q9UMY4 172 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 COL4A3BPQ9Y5P4 624 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 DOT1LQ8TEK3 1739 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 THSD7AQ9UPZ6 1657 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 LRRC10BA6NIK2 292 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 LAD1O00515 517 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 MAP2K7O14733 419 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 BACH1O14867 736 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 GDF11O95390 407 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 MNAT1P51948 309 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 GALNT17Q6IS24 598 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 NME8Q8N427 588 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 RBM17Q96I25 401 aaKnown RBP8.85□□□□□ -0.99
HPS4-205ENST00000429411 DNAJC7Q99615 494 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 SH3GLB2Q9NR46 395 aa8.85□□□□□ -0.99
HPS4-205ENST00000429411 DDNO94850 711 aaPredicted RBP8.84□□□□□ -0.99
HPS4-205ENST00000429411 KRT13P13646 458 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 COASYQ13057 564 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 RPS6KA1Q15418 735 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 SBK1Q52WX2 424 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 FAM83BQ5T0W9 1011 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 CCNI2Q6ZMN8 369 aaPredicted RBP8.84□□□□□ -0.99
HPS4-205ENST00000429411 UNC13DQ70J99 1090 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 SRLQ86TD4 932 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 VPS36Q86VN1 386 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 IFT20Q8IY31 132 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 LRRC15Q8TF66 581 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 U2AF1L4Q8WU68 220 aaKnown RBP8.84□□□□□ -0.99
HPS4-205ENST00000429411 RPGRIP1Q96KN7 1286 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 LRRC27Q9C0I9 530 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 NMRK2Q9NPI5 230 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 GEMIN8Q9NWZ8 242 aaKnown RBP8.84□□□□□ -0.99
HPS4-205ENST00000429411 FAM184BQ9ULE4 1060 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 TESPA1A2RU30 521 aaPredicted RBP8.84□□□□□ -0.99
HPS4-205ENST00000429411 HGSO14964 777 aaPredicted RBP8.84□□□□□ -0.99
HPS4-205ENST00000429411 SH3BP5O60239 455 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 CFBP00751 764 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 PLA2G4BP0C869 781 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 HTRA3P83110 453 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 GRB10Q13322 594 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 GRAPQ13588 217 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 PRKG1Q13976 671 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 MYBPC2Q14324 1141 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 IFNLR1Q8IU57 520 aaPredicted RBP8.84□□□□□ -0.99
HPS4-205ENST00000429411 TPH2Q8IWU9 490 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 C4orf32Q8N8J7 132 aa8.84□□□□□ -0.99
HPS4-205ENST00000429411 GRAPLQ8TC17 118 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms