RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 MARK3P27448 753 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 NBPF20Q3BBV1 942 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 MOXD1Q6UVY6 613 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 TRIM50Q86XT4 487 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 C7orf61Q8IZ16 206 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 C7orf31Q8N865 590 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 ELP1O95163 1332 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 KIAA1217Q5T5P2 1943 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 A0A0U1RQG5 324 aaPredicted RBP16.45■□□□□ 0.22
SGCE-204ENST00000428696 GSTTP1A0A1W2PQM5 241 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 H3BRB1 525 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 DHX15O43143 795 aaKnown RBP16.45■□□□□ 0.22
SGCE-204ENST00000428696 LGALS2P05162 132 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 ANP32AP39687 249 aaKnown RBP16.45■□□□□ 0.22
SGCE-204ENST00000428696 TXKP42681 527 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 PSEN2P49810 448 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 RTP1P59025 263 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 MFSD10Q14728 455 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 KIAA0753Q2KHM9 967 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 SWSAP1Q6NVH7 229 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 MIS18BP1Q6P0N0 1132 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 CKAP2LQ8IYA6 745 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 SLC5A5Q92911 643 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 RIT2Q99578 217 aa16.45■□□□□ 0.22
SGCE-204ENST00000428696 TUT1Q9H6E5 874 aaKnown RBP16.45■□□□□ 0.22
SGCE-204ENST00000428696 MKI67P46013 3256 aaKnown RBP16.44■□□□□ 0.22
SGCE-204ENST00000428696 ARVCFO00192 962 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 CCNE2O96020 404 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 RGS19P49795 217 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 KRT76Q01546 638 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 TLE2Q04725 743 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 SLFN12Q8IYM2 578 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 ETNPPLQ8TBG4 499 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 FAM20AQ96MK3 541 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 MBOAT7Q96N66 472 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 KATNAL1Q9BW62 490 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 UNC45AQ9H3U1 944 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 PRDM5Q9NQX1 630 aaPredicted RBP16.44■□□□□ 0.22
SGCE-204ENST00000428696 ZNF215Q9UL58 517 aaPredicted RBP16.44■□□□□ 0.22
SGCE-204ENST00000428696 PCDHA12Q9UN75 941 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 PCDHB6Q9Y5E3 794 aa16.44■□□□□ 0.22
SGCE-204ENST00000428696 MYH7BA7E2Y1 1941 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 DCDC2CA8MYV0 355 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 PSAPP07602 524 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 TOB1P50616 345 aaPredicted RBP16.43■□□□□ 0.22
SGCE-204ENST00000428696 FOXD4L6Q3SYB3 417 aaPredicted RBP16.43■□□□□ 0.22
SGCE-204ENST00000428696 RILPL1Q5EBL4 403 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 NCAPH2Q6IBW4 605 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 ZNF746Q6NUN9 644 aaPredicted RBP16.43■□□□□ 0.22
SGCE-204ENST00000428696 FOXD4L3Q6VB84 417 aaPredicted RBP16.43■□□□□ 0.22
SGCE-204ENST00000428696 MIER3Q7Z3K6 550 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 KAT2BQ92831 832 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 C16orf70Q9BSU1 422 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 MTMR6Q9Y217 621 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 NOD1Q9Y239 953 aa16.43■□□□□ 0.22
SGCE-204ENST00000428696 GRIN2DO15399 1336 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 WDR64B1ANS9 1081 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 PSMD10O75832 226 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 SUPT20HL2P0C7V6 817 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 TRAPPC10P48553 1259 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 STAT5BP51692 787 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 FAM160B1Q5W0V3 765 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 PDXDC2PQ6P474 469 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 FAM173BQ6P4H8 233 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 BRAPQ7Z569 592 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 HAS1Q92839 578 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 TRPV6Q9H1D0 765 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 TTC12Q9H892 705 aaPredicted RBP16.42■□□□□ 0.22
SGCE-204ENST00000428696 KCNMB3Q9NPA1 279 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 ZNF302Q9NR11 478 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 DISC1Q9NRI5 854 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 GABBR1Q9UBS5 961 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 PRKAG2Q9UGJ0 569 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 TRPC6Q9Y210 931 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 PCDHA10Q9Y5I2 948 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 NR2E3Q9Y5X4 410 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
SGCE-204ENST00000428696 TLR3O15455 904 aaKnown RBP16.41■□□□□ 0.22
SGCE-204ENST00000428696 TECP42680 631 aa16.41■□□□□ 0.22
SGCE-204ENST00000428696 CEBPZQ03701 1054 aaKnown RBP16.41■□□□□ 0.22
SGCE-204ENST00000428696 PTGDRQ13258 359 aa16.41■□□□□ 0.22
SGCE-204ENST00000428696 ABHD15Q6UXT9 468 aa16.41■□□□□ 0.22
SGCE-204ENST00000428696 RNPEPQ9H4A4 650 aa16.41■□□□□ 0.22
SGCE-204ENST00000428696 TMEM39AQ9NV64 488 aa16.41■□□□□ 0.22
SGCE-204ENST00000428696 ERAP1Q9NZ08 941 aa16.41■□□□□ 0.22
SGCE-204ENST00000428696 HDAC6Q9UBN7 1215 aa16.41■□□□□ 0.22
SGCE-204ENST00000428696 FRMPD3Q5JV73 1810 aa16.4■□□□□ 0.22
SGCE-204ENST00000428696 TBX3O15119 743 aa16.4■□□□□ 0.22
SGCE-204ENST00000428696 F2P00734 622 aa16.4■□□□□ 0.22
SGCE-204ENST00000428696 OR52Z1P0C646 297 aa16.4■□□□□ 0.22
SGCE-204ENST00000428696 SYN1P17600 705 aa16.4■□□□□ 0.22
SGCE-204ENST00000428696 JAK3P52333 1124 aa16.4■□□□□ 0.22
SGCE-204ENST00000428696 IGBP1P78318 339 aa16.4■□□□□ 0.22
SGCE-204ENST00000428696 SMAP1Q8IYB5 467 aaPredicted RBP16.4■□□□□ 0.22
SGCE-204ENST00000428696 TRMT13Q9NUP7 481 aaKnown RBP16.4■□□□□ 0.22
SGCE-204ENST00000428696 ZMYND8Q9ULU4 1186 aaPredicted RBP16.4■□□□□ 0.22
SGCE-204ENST00000428696 HOXD8P13378 290 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms